RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 ZNF490Q9ULM2 529 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-205ENST00000571272 DHRS7Q9Y394 339 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 ARIH1Q9Y4X5 557 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-205ENST00000571272 AKR1A1P14550 325 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 TWF1Q12792 350 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 GTF2H3Q13889 308 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 NPTX1Q15818 432 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 INAQ16352 499 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 PTRHD1Q6GMV3 140 aaKnown RBP17.1■□□□□ 0.33
SCARF1-205ENST00000571272 CYP4Z1Q86W10 505 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 CADM3Q8N126 398 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 ZCCHC7Q8N3Z6 543 aaKnown RBP17.1■□□□□ 0.33
SCARF1-205ENST00000571272 TTC30BQ8N4P2 665 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 CLDN19Q8N6F1 224 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 TRPV1Q8NER1 839 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 FAM120BQ96EK7 910 aaKnown RBP17.1■□□□□ 0.33
SCARF1-205ENST00000571272 HEPHQ9BQS7 1158 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 HERC2P3Q9BVR0 1158 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 WDR12Q9GZL7 423 aaKnown RBP17.1■□□□□ 0.33
SCARF1-205ENST00000571272 INTS6Q9UL03 887 aaKnown RBP17.1■□□□□ 0.33
SCARF1-205ENST00000571272 WDR37Q9Y2I8 494 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 AREL1O15033 823 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 RAD51BO15315 384 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 ULK1O75385 1050 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 ALDH2P05091 517 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 PSMB9P28065 219 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 GNPDA1P46926 289 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 MAPK11Q15759 364 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 PHKG1Q16816 387 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 LAIR1Q6GTX8 287 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 GPR149Q86SP6 731 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 RGL4Q8IZJ4 473 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 MYOCQ99972 504 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 BOCQ9BWV1 1114 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 POLE4Q9NR33 117 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 IL37Q9NZH6 218 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 NAALAD2Q9Y3Q0 740 aa17.1■□□□□ 0.33
SCARF1-205ENST00000571272 DIRAS1O95057 198 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 GABARAPO95166 117 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 CCDC159P0C7I6 412 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 CTPS1P17812 591 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 IGFBP5P24593 272 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 CD6P30203 668 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 SGSHP51688 502 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 NCS1P62166 190 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 PHC1P78364 1004 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 SMN1Q16637 294 aaKnown RBP17.09■□□□□ 0.33
SCARF1-205ENST00000571272 CACHD1Q5VU97 1274 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 GLB1LQ6UWU2 654 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 B3GNT8Q7Z7M8 397 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 LRTM1Q9HBL6 345 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 H0Y626 953 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 TRIM16O95361 564 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 ZNF682O95780 498 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 IL6P05231 212 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 BMP4P12644 408 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 CA5AP35218 305 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 TGFBR1P36897 503 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 RING1Q06587 406 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 IRF5Q13568 498 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 C16orf59Q7L2K0 433 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 ADCK1Q86TW2 530 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 ZNF598Q86UK7 904 aaKnown RBP17.09■□□□□ 0.33
SCARF1-205ENST00000571272 DENND1CQ8IV53 801 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 LKAAEAR1Q8TD35 194 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 EID2BQ96D98 161 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 SH3GL1Q99961 368 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 INPP5KQ9BT40 448 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 ADGRE3Q9BY15 652 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 P2RY12Q9H244 342 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 TRIT1Q9H3H1 467 aaKnown RBP17.09■□□□□ 0.33
SCARF1-205ENST00000571272 WWOXQ9NZC7 414 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 PMF1-BGLAPU3KQ54 211 aa17.09■□□□□ 0.33
SCARF1-205ENST00000571272 MYO1GB0I1T2 1018 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 SLC16A6O15403 523 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 KDELR3O43731 214 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 ACSL4O60488 711 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 RYKP34925 604 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 CARD16Q5EG05 197 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 FAM171A1Q5VUB5 890 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 FAM151BQ6UXP7 276 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 MBOAT1Q6ZNC8 495 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 NACA2Q9H009 215 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 CLMPQ9H6B4 373 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 GIN1Q9NXP7 522 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 DNMT3BQ9UBC3 853 aaKnown RBP17.08■□□□□ 0.33
SCARF1-205ENST00000571272 OPTCQ9UBM4 332 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 PKP3Q9Y446 797 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 PCDHB9Q9Y5E1 797 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 PCDHGA10Q9Y5H3 936 aa17.08■□□□□ 0.33
SCARF1-205ENST00000571272 LOC730098B7Z3J9 87 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 DUSP11O75319 330 aaKnown RBP17.08■□□□□ 0.32
SCARF1-205ENST00000571272 FADS2O95864 444 aaKnown RBP17.08■□□□□ 0.32
SCARF1-205ENST00000571272 F11P03951 625 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 RETP07949 1114 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 RHOCP08134 193 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 CD9P21926 228 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 PAX3P23760 479 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 RPS3AP61247 264 aaKnown RBP17.08■□□□□ 0.32
SCARF1-205ENST00000571272 CEP68Q76N32 757 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms