RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 SIMC1Q8NDZ2 872 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 BLOC1S5Q8TDH9 187 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 DEPDC7Q96QD5 511 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 REXO4Q9GZR2 422 aaKnown RBP15.11■□□□□ 0.01
SMG6-207ENST00000570756 NUAK2Q9H093 628 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 GPBP1L1Q9HC44 474 aaPredicted RBP15.11■□□□□ 0.01
SMG6-207ENST00000570756 AASSQ9UDR5 926 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 EIF2B4Q9UI10 523 aaKnown RBP15.11■□□□□ 0.01
SMG6-207ENST00000570756 NDRG4Q9ULP0 352 aaKnown RBP15.11■□□□□ 0.01
SMG6-207ENST00000570756 LOC285095A0A1B0GVY8 99 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 LOC110117498-PIK3R3F6TDL0 507 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 SERPINF2P08697 491 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 HTR3AP46098 478 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 EIF4EBP2Q13542 120 aaPredicted RBP15.11■□□□□ 0.01
SMG6-207ENST00000570756 SMN1Q16637 294 aaKnown RBP15.11■□□□□ 0.01
SMG6-207ENST00000570756 SYT16Q17RD7 645 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 GPSM1Q86YR5 675 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 ZDHHC21Q8IVQ6 265 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 CHPFQ8IZ52 775 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 CELF2-AS1Q8N7Q2 184 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 GLB1L3Q8NCI6 653 aaPredicted RBP15.11■□□□□ 0.01
SMG6-207ENST00000570756 PIK3R3Q92569 461 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 PYCR2Q96C36 320 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 SENP8Q96LD8 212 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 PPP3R2Q96LZ3 170 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 RHNO1Q9BSD3 238 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 MIR1-1HGQ9H1L0 117 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 RNF39Q9H2S5 420 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 IKZF5Q9H5V7 419 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 SP110Q9HB58 689 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 CD274Q9NZQ7 290 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 MPP6Q9NZW5 540 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 TMA7Q9Y2S6 64 aaKnown RBP15.11■□□□□ 0.01
SMG6-207ENST00000570756 ARL5AQ9Y689 179 aa15.11■□□□□ 0.01
SMG6-207ENST00000570756 FKBP9O95302 570 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 FGF1P05230 155 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 IL6P05231 212 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 RPLP0P05388 317 aaKnown RBP15.1■□□□□ 0.01
SMG6-207ENST00000570756 CAPN1P07384 714 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 DARSP14868 501 aaKnown RBP15.1■□□□□ 0.01
SMG6-207ENST00000570756 FMO4P31512 558 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 LIPAP38571 399 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 MAGEA2P43356 314 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 ERVPABLB-1P60509 514 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 SLC10A7Q0GE19 358 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 FAM174BQ3ZCQ3 159 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 RUNDC3AQ59EK9 446 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 FAM209AQ5JX71 171 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 KIAA1614Q5VZ46 1190 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 GCNT7Q6ZNI0 430 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 DCBLD1Q8N8Z6 715 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 TRIM63Q969Q1 353 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 SIGLEC11Q96RL6 698 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 CSNK1G1Q9HCP0 422 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 EHD3Q9NZN3 535 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 CAB39Q9Y376 341 aaPredicted RBP15.1■□□□□ 0.01
SMG6-207ENST00000570756 GRIP1Q9Y3R0 1128 aa15.1■□□□□ 0.01
SMG6-207ENST00000570756 COL4A4P53420 1690 aaPredicted RBP15.1■□□□□ 0.01
SMG6-207ENST00000570756 WASH4PA8MWX3 477 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 GPR32O75388 356 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 HLA-DPA1P20036 260 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 DAPP51397 102 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 GNG2P59768 71 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 ELP6Q0PNE2 266 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 MAD2L1Q13257 205 aaPredicted RBP15.09■□□□□ 0.01
SMG6-207ENST00000570756 OR2T5Q6IEZ7 315 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 LETMD1Q6P1Q0 360 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 ARMCX6Q7L4S7 300 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 SNX20Q7Z614 316 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 RAVER1Q8IY67 606 aaKnown RBP15.09■□□□□ 0.01
SMG6-207ENST00000570756 UBQLNLQ8IYU4 475 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 CHCHD4Q8N4Q1 142 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 OR52B6Q8NGF0 335 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 OR2T29Q8NH02 315 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 DNAJB8Q8NHS0 232 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 FAM120BQ96EK7 910 aaKnown RBP15.09■□□□□ 0.01
SMG6-207ENST00000570756 KLHL5Q96PQ7 755 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 CDK15Q96Q40 435 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 CDADC1Q9BWV3 514 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 KIF17Q9P2E2 1029 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 RIMKLBQ9ULI2 386 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.09■□□□□ 0.01
SMG6-207ENST00000570756 MRPL42Q9Y6G3 142 aaKnown RBP15.09■□□□□ 0.01
SMG6-207ENST00000570756 GBF1Q92538 1859 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 SEC22BO75396 215 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 USP2O75604 605 aaPredicted RBP15.09■□□□□ 0.01
SMG6-207ENST00000570756 CNMDO75829 334 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 GADD45AP24522 165 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 MZF1P28698 734 aaPredicted RBP15.09■□□□□ 0.01
SMG6-207ENST00000570756 ETV6P41212 452 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 GTF2H3Q13889 308 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 TBCEQ15813 527 aaPredicted RBP15.09■□□□□ 0.01
SMG6-207ENST00000570756 DDR2Q16832 855 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 OR13C4Q8NGS5 318 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 GRPEL2Q8TAA5 225 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 BRSK1Q8TDC3 778 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 NETO1Q8TDF5 533 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 GPR21Q99679 349 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 CCDC32Q9BV29 185 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 C1orf109Q9NX04 203 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms