RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 NBPF19A0A087WUL8 3843 aa13.4□□□□□ -0.26
GTF3C1-211ENST00000569653 DOCK10Q96BY6 2186 aa13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 CNOT3O75175 753 aaKnown RBP13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 SUN1O94901 812 aa13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 AP2A2O94973 939 aa13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 GOT2P00505 430 aaKnown RBP13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 ZSCAN5DPP0CG00 497 aa13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 ACVR1Q04771 509 aa13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 PRKAA1Q13131 559 aa13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 P3H1Q32P28 736 aa13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 TMTC4Q5T4D3 741 aa13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 SPESP1Q6UW49 350 aa13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 SYTL1Q8IYJ3 562 aa13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 C1orf54Q8WWF1 131 aa13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 HDAC10Q969S8 669 aa13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 ALS2CR12Q96Q35 445 aa13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 MENTQ9BUN1 341 aa13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 MARCH4Q9P2E8 410 aaPredicted RBP13.39□□□□□ -0.27
GTF3C1-211ENST00000569653 IQCF5A8MTL0 148 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 MATN2O00339 956 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 IFRD1O00458 451 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 LIN7AO14910 233 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 CHRM5P08912 532 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 RAB40ALP0C0E4 278 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 CBSLP0DN79 551 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 CCR7P32248 378 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 CBSP35520 551 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 NSG1P42857 185 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 UQCRFS1P47985 274 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 CD97P48960 835 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 CSE1LP55060 971 aaKnown RBP13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 RPS15P62841 145 aaKnown RBP13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 GRB7Q14451 532 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 ITIH4Q14624 930 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 NADK2Q4G0N4 442 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 TSTD2Q5T7W7 516 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 SEL1L2Q5TEA6 688 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 ZNF662Q6ZS27 426 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 LDB1Q86U70 411 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 SLC13A5Q86YT5 568 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 ZBTB2Q8N680 514 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 C19orf47Q8N9M1 422 aaKnown RBP13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 CPT1BQ92523 772 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 ELMO1Q92556 727 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 COL26A1Q96A83 441 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 NLNQ9BYT8 704 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 SPRTNQ9H040 489 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 KCNF1Q9H3M0 494 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 ACTR5Q9H9F9 607 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 CASS4Q9NQ75 786 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 CIDEBQ9UHD4 219 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 TCFL5Q9UL49 500 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 KLHL20Q9Y2M5 609 aa13.38□□□□□ -0.27
GTF3C1-211ENST00000569653 KRT87PA6NCN2 255 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 C2orf74A8MZ97 194 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 MASP2O00187 686 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 ZNF749O43361 778 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 KLF7O75840 302 aaPredicted RBP13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 CEACAM4O75871 244 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 SNX1Q13596 522 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 PRR30Q53SZ7 412 aaPredicted RBP13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 PAPD7Q5XG87 772 aaKnown RBP13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 SPNS2Q8IVW8 549 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 LINC01555Q8NAE3 123 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 THAP4Q8WY91 577 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 CLIP3Q96DZ5 547 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 RANBP9Q96S59 729 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 ING2Q9H160 280 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 LZTFL1Q9NQ48 299 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 ANKMY1Q9P2S6 941 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 ASF1AQ9Y294 204 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 ESPL1Q14674 2120 aa13.37□□□□□ -0.27
GTF3C1-211ENST00000569653 MDC1Q14676 2089 aaKnown RBP13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 PSMD3O43242 534 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 SORBS2O94875 1100 aaKnown RBP13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 IFNB1P01574 187 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 GSTM1P09488 218 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 ITGAXP20702 1163 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 CYP2A7P20853 494 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 RPL22P35268 128 aaKnown RBP13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 GCGRP47871 477 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 CCL11P51671 97 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 CRADDP78560 199 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 GSTM4Q03013 218 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 CDH17Q12864 832 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 ATP1A4Q13733 1029 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 UBAP2LQ14157 1087 aaKnown RBP13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 NCF4Q15080 339 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 KRT222Q8N1A0 295 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 TEX19Q8NA77 164 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 Q8NA96 180 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 FDCSPQ8NFU4 85 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 OR5K2Q8NHB8 316 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 ANP32BQ92688 251 aaKnown RBP13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 GBP5Q96PP8 586 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 NUDT9Q9BW91 350 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 VPS37BQ9H9H4 285 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 RAB6BQ9NRW1 208 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 SLC22A11Q9NSA0 550 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 LUZP4Q9P127 313 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms