RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 TMEM79Q9BSE2 394 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 SLC12A9Q9BXP2 914 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 TRIM54Q9BYV2 358 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 TTYH1Q9H313 450 aaPredicted RBP22.77■■□□□ 1.24
LINC00543-201ENST00000567234 AIG1Q9NVV5 245 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 RHBDL2Q9NX52 303 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 TCF20Q9UGU0 1960 aaKnown RBP22.77■■□□□ 1.24
LINC00543-201ENST00000567234 XIRP2A4UGR9 3374 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 MRASO14807 208 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 C8BP07358 591 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 MSH3P20585 1137 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 GGT5P36269 586 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 DPP6P42658 865 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 SLC6A11P48066 632 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 ALDH3B2P48448 385 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 CEACAM7Q14002 265 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 MILR1Q7Z6M3 343 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 EFCAB3Q8N7B9 438 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 OR4F6Q8NGB9 312 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 OR9I1Q8NGQ6 314 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 BTN2A2Q8WVV5 523 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 NTMT1Q9BV86 223 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 RIOK2Q9BVS4 552 aaKnown RBP22.76■■□□□ 1.23
LINC00543-201ENST00000567234 BRINP2Q9C0B6 783 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 ABCG8Q9H221 673 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 UBAP1Q9NZ09 502 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 SUN2Q9UH99 717 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 COLQQ9Y215 455 aaPredicted RBP22.76■■□□□ 1.23
LINC00543-201ENST00000567234 ANGPTL3Q9Y5C1 460 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 EYSQ5T1H1 3165 aa22.76■■□□□ 1.23
LINC00543-201ENST00000567234 CCDC160A6NGH7 325 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 TRIM38O00635 465 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 FTH1P02794 183 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 CAPN1P07384 714 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 ELFN1P0C7U0 828 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 ITGB7P26010 798 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 SLC5A2P31639 672 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 CBX3Q13185 183 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 LRRC36Q1X8D7 754 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 FNDC3BQ53EP0 1204 aaKnown RBP22.75■■□□□ 1.23
LINC00543-201ENST00000567234 C8orf82Q6P1X6 216 aaPredicted RBP22.75■■□□□ 1.23
LINC00543-201ENST00000567234 ASB11Q8WXH4 323 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 OR8D1Q8WZ84 308 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 ITPKCQ96DU7 683 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 ZFYVE19Q96K21 471 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 PARVBQ9HBI1 364 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 GIMAP2Q9UG22 337 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 RPIAP49247 311 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 MYBPC1Q00872 1141 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 PDCD4Q53EL6 469 aaKnown RBP22.75■■□□□ 1.23
LINC00543-201ENST00000567234 SLC44A4Q53GD3 710 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 C9orf64Q5T6V5 341 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 ZNF366Q8N895 744 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 ACOX2Q99424 681 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 RIMS3Q9UJD0 308 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 CROTQ9UKG9 612 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 DENND4AQ7Z401 1863 aa22.75■■□□□ 1.23
LINC00543-201ENST00000567234 OTOL1A6NHN0 477 aaPredicted RBP22.74■■□□□ 1.23
LINC00543-201ENST00000567234 KPNA3O00505 521 aaPredicted RBP22.74■■□□□ 1.23
LINC00543-201ENST00000567234 STK16O75716 305 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 WDR47O94967 919 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 PORP16435 677 aaPredicted RBP22.74■■□□□ 1.23
LINC00543-201ENST00000567234 FCARP24071 287 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 ELP6Q0PNE2 266 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 HSPA14Q0VDF9 509 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 ELAVL3Q14576 367 aaKnown RBP22.74■■□□□ 1.23
LINC00543-201ENST00000567234 ATP6AP1LQ52LC2 224 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 C6orf136Q5SQH8 315 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 BLOC1S3Q6QNY0 202 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 UBE2R2Q712K3 238 aaPredicted RBP22.74■■□□□ 1.23
LINC00543-201ENST00000567234 GET4Q7L5D6 327 aaPredicted RBP22.74■■□□□ 1.23
LINC00543-201ENST00000567234 CYP2U1Q7Z449 544 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 OR2T11Q8NH01 316 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 HM13Q8TCT9 377 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 CDK15Q96Q40 435 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 SPAG4Q9NPE6 437 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 HPS4Q9NQG7 708 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 TUBA8Q9NY65 449 aaPredicted RBP22.74■■□□□ 1.23
LINC00543-201ENST00000567234 TRPS1Q9UHF7 1281 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 PDE10AQ9Y233 779 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 LRRK1Q38SD2 2015 aa22.74■■□□□ 1.23
LINC00543-201ENST00000567234 FADS2P1A8MWK0 482 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 GFYI3L273 518 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 WNT9AO14904 365 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 SGTAO43765 313 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 KATNA1O75449 491 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 EBLN1P0CF75 366 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 EPB42P16452 691 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 HMOX2P30519 316 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 ARL1P40616 181 aaPredicted RBP22.73■■□□□ 1.23
LINC00543-201ENST00000567234 HNMTP50135 292 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 TXNL4AP83876 142 aaKnown RBP22.73■■□□□ 1.23
LINC00543-201ENST00000567234 MESP2Q0VG99 397 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 GRIN2CQ14957 1233 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 IRAK1BP1Q5VVH5 260 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 TMEM184AQ6ZMB5 413 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 Q6ZSR9 355 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 DET1Q7L5Y6 550 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 ASZ1Q8WWH4 475 aa22.73■■□□□ 1.23
LINC00543-201ENST00000567234 GLYATL1Q969I3 302 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms