RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 GSDMDP57764 484 aa22.96■■□□□ 1.27
RAB40C-209ENST00000565511 GSTM4Q03013 218 aa22.96■■□□□ 1.27
RAB40C-209ENST00000565511 LINC00523Q86TU6 105 aa22.96■■□□□ 1.27
RAB40C-209ENST00000565511 VRK3Q8IV63 474 aa22.96■■□□□ 1.27
RAB40C-209ENST00000565511 FAM20CQ8IXL6 584 aa22.96■■□□□ 1.27
RAB40C-209ENST00000565511 C19orf47Q8N9M1 422 aaKnown RBP22.96■■□□□ 1.27
RAB40C-209ENST00000565511 CASS4Q9NQ75 786 aa22.96■■□□□ 1.27
RAB40C-209ENST00000565511 SHANK1Q9Y566 2161 aa22.96■■□□□ 1.27
RAB40C-209ENST00000565511 CHRM5P08912 532 aaPredicted RBP22.95■■□□□ 1.26
RAB40C-209ENST00000565511 RAB40ALP0C0E4 278 aa22.95■■□□□ 1.26
RAB40C-209ENST00000565511 ITGA1P56199 1179 aa22.95■■□□□ 1.26
RAB40C-209ENST00000565511 ACVR1Q04771 509 aa22.95■■□□□ 1.26
RAB40C-209ENST00000565511 SEL1L2Q5TEA6 688 aa22.95■■□□□ 1.26
RAB40C-209ENST00000565511 PPP1R21Q6ZMI0 780 aa22.95■■□□□ 1.26
RAB40C-209ENST00000565511 LDB1Q86U70 411 aaPredicted RBP22.95■■□□□ 1.26
RAB40C-209ENST00000565511 THAP4Q8WY91 577 aa22.95■■□□□ 1.26
RAB40C-209ENST00000565511 ALS2CR12Q96Q35 445 aa22.95■■□□□ 1.26
RAB40C-209ENST00000565511 MARCH4Q9P2E8 410 aaPredicted RBP22.95■■□□□ 1.26
RAB40C-209ENST00000565511 CIDEBQ9UHD4 219 aa22.95■■□□□ 1.26
RAB40C-209ENST00000565511 TCFL5Q9UL49 500 aa22.95■■□□□ 1.26
RAB40C-209ENST00000565511 GUCA1BQ9UMX6 200 aa22.95■■□□□ 1.26
RAB40C-209ENST00000565511 CDYLQ9Y232 598 aa22.95■■□□□ 1.26
RAB40C-209ENST00000565511 TDRKHQ9Y2W6 561 aaKnown RBP22.95■■□□□ 1.26
RAB40C-209ENST00000565511 HEATR9A2RTY3 570 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 CLEC18AA5D8T8 446 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 IQCF5A8MTL0 148 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 ZNF749O43361 778 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 FTH1P02794 183 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 KLK3P07288 261 aaPredicted RBP22.94■■□□□ 1.26
RAB40C-209ENST00000565511 CCR7P32248 378 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 FDFT1P37268 417 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 CCL11P51671 97 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 FOXL2P58012 376 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 AFTPHQ6ULP2 937 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 CLEC18BQ6UXF7 455 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 ZBTB2Q8N680 514 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 TEX19Q8NA77 164 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 CLEC18CQ8NCF0 446 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 OR5K2Q8NHB8 316 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 RANBP9Q96S59 729 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 NLNQ9BYT8 704 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 SPRTNQ9H040 489 aaPredicted RBP22.94■■□□□ 1.26
RAB40C-209ENST00000565511 ING2Q9H160 280 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 RAB6BQ9NRW1 208 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 SNX7Q9UNH6 387 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 TCAF1Q9Y4C2 921 aa22.94■■□□□ 1.26
RAB40C-209ENST00000565511 ERI2A8K979 691 aaKnown RBP22.93■■□□□ 1.26
RAB40C-209ENST00000565511 CBSLP0DN79 551 aa22.93■■□□□ 1.26
RAB40C-209ENST00000565511 STIP1P31948 543 aaKnown RBP22.93■■□□□ 1.26
RAB40C-209ENST00000565511 SHMT2P34897 504 aa22.93■■□□□ 1.26
RAB40C-209ENST00000565511 CBSP35520 551 aa22.93■■□□□ 1.26
RAB40C-209ENST00000565511 SYTL3Q4VX76 610 aa22.93■■□□□ 1.26
RAB40C-209ENST00000565511 ZNF449Q6P9G9 518 aa22.93■■□□□ 1.26
RAB40C-209ENST00000565511 TBC1D21Q8IYX1 336 aa22.93■■□□□ 1.26
RAB40C-209ENST00000565511 RNF10Q8N5U6 811 aaKnown RBP22.93■■□□□ 1.26
RAB40C-209ENST00000565511 MENTQ9BUN1 341 aa22.93■■□□□ 1.26
RAB40C-209ENST00000565511 SYTL2Q9HCH5 934 aa22.93■■□□□ 1.26
RAB40C-209ENST00000565511 MLXIPLQ9NP71 852 aa22.93■■□□□ 1.26
RAB40C-209ENST00000565511 RIMKLBQ9ULI2 386 aa22.93■■□□□ 1.26
RAB40C-209ENST00000565511 ZNF148Q9UQR1 794 aa22.93■■□□□ 1.26
RAB40C-209ENST00000565511 USP9YO00507 2555 aaPredicted RBP22.93■■□□□ 1.26
RAB40C-209ENST00000565511 E7EQ34 232 aa22.92■■□□□ 1.26
RAB40C-209ENST00000565511 ATXN8OSP0DMR3 200 aa22.92■■□□□ 1.26
RAB40C-209ENST00000565511 RPL22P35268 128 aaKnown RBP22.92■■□□□ 1.26
RAB40C-209ENST00000565511 CRADDP78560 199 aa22.92■■□□□ 1.26
RAB40C-209ENST00000565511 NCF4Q15080 339 aa22.92■■□□□ 1.26
RAB40C-209ENST00000565511 NADK2Q4G0N4 442 aa22.92■■□□□ 1.26
RAB40C-209ENST00000565511 KRT222Q8N1A0 295 aa22.92■■□□□ 1.26
RAB40C-209ENST00000565511 TXLNBQ8N3L3 684 aa22.92■■□□□ 1.26
RAB40C-209ENST00000565511 OR4L1Q8NH43 312 aa22.92■■□□□ 1.26
RAB40C-209ENST00000565511 SEC14L1Q92503 715 aa22.92■■□□□ 1.26
RAB40C-209ENST00000565511 SLC25A23Q9BV35 468 aa22.92■■□□□ 1.26
RAB40C-209ENST00000565511 ACSS2Q9NR19 701 aa22.92■■□□□ 1.26
RAB40C-209ENST00000565511 KLHL20Q9Y2M5 609 aa22.92■■□□□ 1.26
RAB40C-209ENST00000565511 ANKRD12Q6UB98 2062 aa22.91■■□□□ 1.26
RAB40C-209ENST00000565511 QSOX1O00391 747 aa22.91■■□□□ 1.26
RAB40C-209ENST00000565511 CNOT3O75175 753 aaKnown RBP22.91■■□□□ 1.26
RAB40C-209ENST00000565511 OR56A5P0C7T3 313 aa22.91■■□□□ 1.26
RAB40C-209ENST00000565511 ADRA1DP25100 572 aa22.91■■□□□ 1.26
RAB40C-209ENST00000565511 PKLRP30613 574 aa22.91■■□□□ 1.26
RAB40C-209ENST00000565511 CD97P48960 835 aa22.91■■□□□ 1.26
RAB40C-209ENST00000565511 ATP1A4Q13733 1029 aa22.91■■□□□ 1.26
RAB40C-209ENST00000565511 GRB7Q14451 532 aa22.91■■□□□ 1.26
RAB40C-209ENST00000565511 C1orf189Q5VU69 101 aa22.91■■□□□ 1.26
RAB40C-209ENST00000565511 SLC22A15Q8IZD6 547 aa22.91■■□□□ 1.26
RAB40C-209ENST00000565511 LINC01555Q8NAE3 123 aa22.91■■□□□ 1.26
RAB40C-209ENST00000565511 OR6P1Q8NGX9 317 aa22.91■■□□□ 1.26
RAB40C-209ENST00000565511 IL17FQ96PD4 163 aa22.91■■□□□ 1.26
RAB40C-209ENST00000565511 AP1M1Q9BXS5 423 aa22.91■■□□□ 1.26
RAB40C-209ENST00000565511 FRMD8P1Q9BZ68 369 aaPredicted RBP22.91■■□□□ 1.26
RAB40C-209ENST00000565511 SERTAD3Q9UJW9 196 aa22.91■■□□□ 1.26
RAB40C-209ENST00000565511 SPTAN1Q13813 2472 aaKnown RBP22.91■■□□□ 1.26
RAB40C-209ENST00000565511 RP1L1Q8IWN7 2480 aaPredicted RBP22.9■■□□□ 1.26
RAB40C-209ENST00000565511 A0A0J9YY10 115 aa22.9■■□□□ 1.26
RAB40C-209ENST00000565511 E7EVH7 732 aa22.9■■□□□ 1.26
RAB40C-209ENST00000565511 CEACAM4O75871 244 aa22.9■■□□□ 1.26
RAB40C-209ENST00000565511 TMEM63AO94886 807 aa22.9■■□□□ 1.26
RAB40C-209ENST00000565511 APRTP07741 180 aa22.9■■□□□ 1.26
RAB40C-209ENST00000565511 UQCRFS1P47985 274 aa22.9■■□□□ 1.26
RAB40C-209ENST00000565511 PGDP52209 483 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms