RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 PNPLA4P41247 253 aa15.97■□□□□ 0.15
LINC00554-201ENST00000564841 ARSDP51689 593 aa15.97■□□□□ 0.15
LINC00554-201ENST00000564841 GALNT1Q10472 559 aaPredicted RBP15.97■□□□□ 0.15
LINC00554-201ENST00000564841 TOP3AQ13472 1001 aaPredicted RBP15.97■□□□□ 0.15
LINC00554-201ENST00000564841 TIGD5Q53EQ6 642 aa15.97■□□□□ 0.15
LINC00554-201ENST00000564841 ZDHHC17Q8IUH5 632 aa15.97■□□□□ 0.15
LINC00554-201ENST00000564841 PHACTR4Q8IZ21 702 aa15.97■□□□□ 0.15
LINC00554-201ENST00000564841 L3HYPDHQ96EM0 354 aa15.97■□□□□ 0.15
LINC00554-201ENST00000564841 OR51E2Q9H255 320 aa15.97■□□□□ 0.15
LINC00554-201ENST00000564841 COMMD8Q9NX08 183 aa15.97■□□□□ 0.15
LINC00554-201ENST00000564841 TBKBP1A7MCY6 615 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 GGT1P19440 569 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 AZGP1P25311 298 aaKnown RBP15.96■□□□□ 0.15
LINC00554-201ENST00000564841 SNX16P57768 344 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 MAXP61244 160 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 PTCHD3Q3KNS1 767 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 SERINC5Q86VE9 423 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 CRYBG2Q8N1P7 616 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 GLB1L3Q8NCI6 653 aaPredicted RBP15.96■□□□□ 0.15
LINC00554-201ENST00000564841 SCAMP5Q8TAC9 235 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 CHAC2Q8WUX2 184 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 RHBDF1Q96CC6 855 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 PCED1BQ96HM7 432 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 REXO5Q96IC2 774 aaKnown RBP15.96■□□□□ 0.15
LINC00554-201ENST00000564841 TMEM209Q96SK2 561 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 SMOQ99835 787 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 THUMPD3Q9BV44 507 aaKnown RBP15.96■□□□□ 0.15
LINC00554-201ENST00000564841 MMP27Q9H306 513 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 WDCPQ9H6R7 721 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 TREX1Q9NSU2 369 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 AIG1Q9NVV5 245 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 TAS2R9Q9NYW1 312 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 NUFIP1Q9UHK0 495 aaKnown RBP15.96■□□□□ 0.15
LINC00554-201ENST00000564841 MAGEL2Q9UJ55 1249 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 IKZF3Q9UKT9 509 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 Q9Y3F1 56 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 PCDHGB1Q9Y5G3 927 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 H3BQ06 376 aaPredicted RBP15.96■□□□□ 0.15
LINC00554-201ENST00000564841 ADAMTS4O75173 837 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 PAPSS2O95340 614 aaPredicted RBP15.96■□□□□ 0.15
LINC00554-201ENST00000564841 OR4Q2P0C623 313 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 DNAJB1P25685 340 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 SNRPD2P62316 118 aaKnown RBP15.96■□□□□ 0.15
LINC00554-201ENST00000564841 CYP4F2P78329 520 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 CD83Q01151 205 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 CYP4F3Q08477 520 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 ATP6AP1LQ52LC2 224 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 ZMAT1Q5H9K5 638 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 ZNF544Q6NX49 715 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 Q6ZPB1 254 aaPredicted RBP15.96■□□□□ 0.15
LINC00554-201ENST00000564841 CEP68Q76N32 757 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 FNDC5Q8NAU1 212 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 RAET1EQ8TD07 263 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 SMPD4Q9NXE4 827 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 MAT2BQ9NZL9 334 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 MPP6Q9NZW5 540 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 ZNF225Q9UK10 706 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 TBC1D24Q9ULP9 559 aa15.96■□□□□ 0.15
LINC00554-201ENST00000564841 PRG3Q9Y2Y8 225 aaPredicted RBP15.96■□□□□ 0.15
LINC00554-201ENST00000564841 hCG_2039718K7EN88 272 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 RGS10O43665 173 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 TULP3O75386 442 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 HPRP00739 348 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 TAB1Q15750 504 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 GTDC1Q4AE62 458 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 PNCKQ6P2M8 343 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 GLRX5Q86SX6 157 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.95■□□□□ 0.14
LINC00554-201ENST00000564841 C10orf111Q8N326 155 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 TRMOQ9BU70 441 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 MUC13Q9H3R2 512 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 TRHDEQ9UKU6 1024 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 MYLKQ15746 1914 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 SAGE2PA6NJ88 616 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 PRSS56P0CW18 603 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 KRT20P35900 424 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 TM4SF4P48230 202 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 SDE2Q6IQ49 451 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 ERAP2Q6P179 960 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 PRSS48Q7RTY5 328 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 NECAB2Q7Z6G3 386 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 GRAMD2AQ8IUY3 354 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 NCLNQ969V3 563 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 NACC2Q96BF6 587 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 FSD1LQ9BXM9 530 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 TMEM39AQ9NV64 488 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 DNMT3LQ9UJW3 386 aa15.95■□□□□ 0.14
LINC00554-201ENST00000564841 NUP214P35658 2090 aaPredicted RBP15.95■□□□□ 0.14
LINC00554-201ENST00000564841 M0R082 166 aa15.94■□□□□ 0.14
LINC00554-201ENST00000564841 GPR182O15218 404 aa15.94■□□□□ 0.14
LINC00554-201ENST00000564841 APOA1P02647 267 aa15.94■□□□□ 0.14
LINC00554-201ENST00000564841 S100A5P33763 92 aa15.94■□□□□ 0.14
LINC00554-201ENST00000564841 ITKQ08881 620 aa15.94■□□□□ 0.14
LINC00554-201ENST00000564841 GTF2H3Q13889 308 aa15.94■□□□□ 0.14
LINC00554-201ENST00000564841 NEK10Q6ZWH5 1172 aa15.94■□□□□ 0.14
LINC00554-201ENST00000564841 ZMIZ2Q8NF64 920 aa15.94■□□□□ 0.14
LINC00554-201ENST00000564841 FAM162AQ96A26 154 aa15.94■□□□□ 0.14
LINC00554-201ENST00000564841 VPS35Q96QK1 796 aa15.94■□□□□ 0.14
LINC00554-201ENST00000564841 ASB1Q9Y576 335 aa15.94■□□□□ 0.14
LINC00554-201ENST00000564841 OR2A25A4D2G3 310 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms