RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 MMP20O60882 483 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 MATN4O95460 622 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 ESRRBO95718 433 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 EGFP01133 1207 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 ITGB2P05107 769 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 ENO1P06733 434 aaKnown RBP6.39□□□□□ -1.39
CAPN3-210ENST00000561817 ASGR2P07307 311 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 OR56A5P0C7T3 313 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 PRR35P0CG20 571 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 EPORP19235 508 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 XPAP23025 273 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-210ENST00000561817 ADSLP30566 484 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-210ENST00000561817 GGT5P36269 586 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 WASP42768 502 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 ERVPABLB-1P60509 514 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 CDKL1Q00532 357 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 TMEM115Q12893 351 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-210ENST00000561817 TRAF3Q13114 568 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 PTK2BQ14289 1009 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 FGL2Q14314 439 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 TCEA2Q15560 299 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 CST6Q15828 149 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 PDCD2Q16342 344 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-210ENST00000561817 ZNF284Q2VY69 593 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 TTLL9Q3SXZ7 439 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 XKR7Q5GH72 579 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 FAM46CQ5VWP2 391 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 TMEM198Q66K66 360 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 CLEC6AQ6EIG7 209 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 METTL2BQ6P1Q9 378 aaKnown RBP6.39□□□□□ -1.39
CAPN3-210ENST00000561817 FBXL19Q6PCT2 694 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 ADAMTSL4Q6UY14 1074 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 DET1Q7L5Y6 550 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 RAB44Q7Z6P3 723 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-210ENST00000561817 DSG4Q86SJ6 1040 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 ADGRG6Q86SQ4 1221 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 KLHDC8AQ8IYD2 350 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 KIRREL3Q8IZU9 778 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 SLC44A3Q8N4M1 653 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 ZNF513Q8N8E2 541 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-210ENST00000561817 IL17RCQ8NAC3 791 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 TRPC4APQ8TEL6 797 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 CHAC2Q8WUX2 184 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 ESAMQ96AP7 390 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 RHBDF1Q96CC6 855 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 NUS1Q96E22 293 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 PPP1R16AQ96I34 528 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 COX14Q96I36 57 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 KCNA7Q96RP8 456 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 ZNF382Q96SR6 550 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 BTBD10Q9BSF8 475 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 PHF7Q9BWX1 381 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-210ENST00000561817 SLC12A9Q9BXP2 914 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 KLC4Q9NSK0 619 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 CD274Q9NZQ7 290 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 EIF2B4Q9UI10 523 aaKnown RBP6.39□□□□□ -1.39
CAPN3-210ENST00000561817 ZFR2Q9UPR6 939 aaKnown RBP6.39□□□□□ -1.39
CAPN3-210ENST00000561817 PDE10AQ9Y233 779 aa6.39□□□□□ -1.39
CAPN3-210ENST00000561817 PCYT1BQ9Y5K3 369 aaPredicted RBP6.39□□□□□ -1.39
CAPN3-210ENST00000561817 COPG1Q9Y678 874 aaKnown RBP6.39□□□□□ -1.39
CAPN3-210ENST00000561817 NCF1BA6NI72 391 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 PRSS47A8MTI9 375 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 NCF1CA8MVU1 366 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 NEMP1O14524 444 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 PIP5K1BO14986 540 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 KPNA5O15131 536 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 RAD51BO15315 384 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 SLC16A5O15375 505 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 GSC2O15499 205 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 DCXO43602 365 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 PSIP1O75475 530 aaKnown RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 SKAP2O75563 359 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 MLYCDO95822 493 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 C8GP07360 202 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 ENO2P09104 434 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 ALDOCP09972 364 aaKnown RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 ESRRAP11474 423 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 NCF1P14598 390 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 MSH3P20585 1137 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 C5AR1P21730 350 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 PIK3R1P27986 724 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 TEAD1P28347 426 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 NTSR1P30989 418 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 AKT1P31749 480 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 HTR3AP46098 478 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 SLC6A12P48065 614 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 MRPL19P49406 292 aaKnown RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 ATP4BP51164 291 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 PKNOX1P55347 436 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 ZP2Q05996 745 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 CDC16Q13042 620 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 SP140Q13342 867 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 RIPK1Q13546 671 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 HERC3Q15034 1050 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 WSCD2Q2TBF2 565 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 FBXW10Q5XX13 1052 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 SULT1C3Q6IMI6 304 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 LETMD1Q6P1Q0 360 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 TTC23LQ6PF05 361 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 TMEM220Q6QAJ8 160 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms