RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ACADLP28330 430 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 PRAMEP78395 509 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 COLEC12Q5KU26 742 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 TSTD2Q5T7W7 516 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 FAM198BQ6UWH4 519 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 CDHR3Q6ZTQ4 885 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 GPR135Q8IZ08 494 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 CCDC89Q8N998 374 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 PEX13Q92968 403 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 HDAC10Q969S8 669 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 DPH2Q9BQC3 489 aaPredicted RBP13.71□□□□□ -0.21
SNX6-210ENST00000557341 TSSK1BQ9BXA7 367 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 RAB6BQ9NRW1 208 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 OR6C2Q9NZP2 312 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 TCFL5Q9UL49 500 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 RIMKLBQ9ULI2 386 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 TDRKHQ9Y2W6 561 aaKnown RBP13.71□□□□□ -0.21
SNX6-210ENST00000557341 PCSK5Q92824 1860 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 SHANK1Q9Y566 2161 aa13.71□□□□□ -0.22
SNX6-210ENST00000557341 ARGFXA6NJG6 315 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 C9J4A7 227 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 APRTP07741 180 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 CHRM5P08912 532 aaPredicted RBP13.7□□□□□ -0.22
SNX6-210ENST00000557341 PPARGP37231 505 aaPredicted RBP13.7□□□□□ -0.22
SNX6-210ENST00000557341 PTGIRP43119 386 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 PGDP52209 483 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 ACVR1Q04771 509 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 CHAF1BQ13112 559 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 NCF4Q15080 339 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 IGFBP7Q16270 282 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 PTCHD3Q3KNS1 767 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 LCN10Q6JVE6 187 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 NAPRTQ6XQN6 538 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 UNC5AQ6ZN44 842 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 NLRP9Q7RTR0 991 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 TRIM73Q86UV7 250 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 PPHLN1Q8NEY8 458 aaKnown RBP13.7□□□□□ -0.22
SNX6-210ENST00000557341 OR6P1Q8NGX9 317 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 OR4L1Q8NH43 312 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 ADAMTS17Q8TE56 1095 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 C1orf54Q8WWF1 131 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 TCTN2Q96GX1 697 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 OR2A14Q96R47 310 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 SLC25A23Q9BV35 468 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 ING2Q9H160 280 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 CASS4Q9NQ75 786 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 PAK5Q9P286 719 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 SLC2A6Q9UGQ3 507 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 GUCA1BQ9UMX6 200 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 PADI2Q9Y2J8 665 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 TCAF1Q9Y4C2 921 aa13.7□□□□□ -0.22
SNX6-210ENST00000557341 PCDHGA9Q9Y5G4 932 aaKnown RBP13.7□□□□□ -0.22
SNX6-210ENST00000557341 A0A0J9YY10 115 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 BHMG1C9JSJ3 638 aaPredicted RBP13.69□□□□□ -0.22
SNX6-210ENST00000557341 ZNF749O43361 778 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 OR1I1O60431 355 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 TMEM63AO94886 807 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 PDGFAP04085 211 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 AGXTP21549 392 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 GRIA1P42261 906 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 SNX1Q13596 522 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 DEFB110Q30KQ9 67 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 FASTKD1Q53R41 847 aaKnown RBP13.69□□□□□ -0.22
SNX6-210ENST00000557341 AARS2Q5JTZ9 985 aaKnown RBP13.69□□□□□ -0.22
SNX6-210ENST00000557341 ZNF534Q76KX8 674 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 SLC22A15Q8IZD6 547 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 SGSM3Q96HU1 749 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 ZNF778Q96MU6 729 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 C17orf62Q9BQA9 187 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 CHRNA10Q9GZZ6 450 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 SPHK1Q9NYA1 384 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 G3BP2Q9UN86 482 aaKnown RBP13.69□□□□□ -0.22
SNX6-210ENST00000557341 AP1M2Q9Y6Q5 423 aa13.69□□□□□ -0.22
SNX6-210ENST00000557341 UTP20O75691 2785 aaKnown RBP13.69□□□□□ -0.22
SNX6-210ENST00000557341 NAV2Q8IVL1 2488 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 OR2B3O76000 313 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 RPN2P04844 631 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 CAPN1P07384 714 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 ETS1P14921 441 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 RAB28P51157 221 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 CCL11P51671 97 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 CSE1LP55060 971 aaKnown RBP13.68□□□□□ -0.22
SNX6-210ENST00000557341 SEMA3AQ14563 771 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 KIR2DS3Q14952 304 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 RPS6KA1Q15418 735 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 SLC5A12Q1EHB4 618 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 DNAJC21Q5F1R6 531 aaKnown RBP13.68□□□□□ -0.22
SNX6-210ENST00000557341 MEI1Q5TIA1 1274 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 ZNF385CQ66K41 422 aaPredicted RBP13.68□□□□□ -0.22
SNX6-210ENST00000557341 PRUNE1Q86TP1 453 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 ATCAYQ86WG3 371 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 RAB43Q86YS6 212 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 FLVCR1-AS1Q8TAF5 88 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 ASZ1Q8WWH4 475 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 MIB2Q96AX9 1013 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 DHRS4Q9BTZ2 278 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 AP1M1Q9BXS5 423 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 FAM60AQ9NP50 221 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 MLXIPLQ9NP71 852 aa13.68□□□□□ -0.22
SNX6-210ENST00000557341 EIF2B3Q9NR50 452 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms