RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 RUFY1Q96T51 708 aa23.67■■□□□ 1.38
PRKCH-216ENST00000555542 CARD6Q9BX69 1037 aa23.67■■□□□ 1.38
PRKCH-216ENST00000555542 AKIRIN1Q9H9L7 192 aaPredicted RBP23.67■■□□□ 1.38
PRKCH-216ENST00000555542 ZNF71Q9NQZ8 489 aaPredicted RBP23.67■■□□□ 1.38
PRKCH-216ENST00000555542 MARCH4Q9P2E8 410 aaPredicted RBP23.67■■□□□ 1.38
PRKCH-216ENST00000555542 MAN2B2Q9Y2E5 1009 aa23.67■■□□□ 1.38
PRKCH-216ENST00000555542 GCN1Q92616 2671 aaKnown RBP23.67■■□□□ 1.38
PRKCH-216ENST00000555542 PRMT5O14744 637 aaPredicted RBP23.66■■□□□ 1.38
PRKCH-216ENST00000555542 NDUFS3O75489 264 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 FURINP09958 794 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 UGT2B7P16662 529 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 TPSB2P20231 275 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 PTPN4P29074 926 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 RPS18P62269 152 aaKnown RBP23.66■■□□□ 1.38
PRKCH-216ENST00000555542 SARNPP82979 210 aaKnown RBP23.66■■□□□ 1.38
PRKCH-216ENST00000555542 CDK16Q00536 496 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 ABRQ12979 859 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 TPSAB1Q15661 275 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 DNAJC21Q5F1R6 531 aaKnown RBP23.66■■□□□ 1.38
PRKCH-216ENST00000555542 TMEM135Q86UB9 458 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 SLC22A15Q8IZD6 547 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 PRELID2Q8N945 189 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 OR1L3Q8NH93 324 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 LKAAEAR1Q8TD35 194 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 PANX3Q96QZ0 392 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 AP1M1Q9BXS5 423 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 ACTR5Q9H9F9 607 aaPredicted RBP23.66■■□□□ 1.38
PRKCH-216ENST00000555542 TREX1Q9NSU2 369 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 SYBUQ9NX95 663 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 OR6C2Q9NZP2 312 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 GNPTGQ9UJJ9 305 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 KCNMB2Q9Y691 235 aa23.66■■□□□ 1.38
PRKCH-216ENST00000555542 ISM1B1AKI9 464 aa23.65■■□□□ 1.38
PRKCH-216ENST00000555542 E7EQ34 232 aa23.65■■□□□ 1.38
PRKCH-216ENST00000555542 ITGA1P56199 1179 aa23.65■■□□□ 1.38
PRKCH-216ENST00000555542 GPS1Q13098 491 aa23.65■■□□□ 1.38
PRKCH-216ENST00000555542 LRRC8BQ6P9F7 803 aa23.65■■□□□ 1.38
PRKCH-216ENST00000555542 CDHR3Q6ZTQ4 885 aa23.65■■□□□ 1.38
PRKCH-216ENST00000555542 GPR135Q8IZ08 494 aa23.65■■□□□ 1.38
PRKCH-216ENST00000555542 C19orf47Q8N9M1 422 aaKnown RBP23.65■■□□□ 1.38
PRKCH-216ENST00000555542 SLC38A9Q8NBW4 561 aa23.65■■□□□ 1.38
PRKCH-216ENST00000555542 SKA2Q8WVK7 121 aaPredicted RBP23.65■■□□□ 1.38
PRKCH-216ENST00000555542 ABHD17AQ96GS6 310 aa23.65■■□□□ 1.38
PRKCH-216ENST00000555542 CHST8Q9H2A9 424 aa23.65■■□□□ 1.38
PRKCH-216ENST00000555542 FARSAQ9Y285 508 aaKnown RBP23.65■■□□□ 1.38
PRKCH-216ENST00000555542 CFAP46Q8IYW2 2715 aa23.64■■□□□ 1.38
PRKCH-216ENST00000555542 MEN1O00255 615 aa23.64■■□□□ 1.37
PRKCH-216ENST00000555542 SUV39H1O43463 412 aa23.64■■□□□ 1.37
PRKCH-216ENST00000555542 MSL3P1P0C860 447 aa23.64■■□□□ 1.37
PRKCH-216ENST00000555542 CASC4Q6P4E1 433 aa23.64■■□□□ 1.37
PRKCH-216ENST00000555542 CES3Q6UWW8 571 aa23.64■■□□□ 1.37
PRKCH-216ENST00000555542 SYVN1Q86TM6 617 aa23.64■■□□□ 1.37
PRKCH-216ENST00000555542 VRK3Q8IV63 474 aa23.64■■□□□ 1.37
PRKCH-216ENST00000555542 MPP5Q8N3R9 675 aa23.64■■□□□ 1.37
PRKCH-216ENST00000555542 MAGOHBQ96A72 148 aaKnown RBP23.64■■□□□ 1.37
PRKCH-216ENST00000555542 TCTN2Q96GX1 697 aa23.64■■□□□ 1.37
PRKCH-216ENST00000555542 LRFN5Q96NI6 719 aa23.64■■□□□ 1.37
PRKCH-216ENST00000555542 OR2A14Q96R47 310 aa23.64■■□□□ 1.37
PRKCH-216ENST00000555542 IRAK4Q9NWZ3 460 aa23.64■■□□□ 1.37
PRKCH-216ENST00000555542 SPHK1Q9NYA1 384 aa23.64■■□□□ 1.37
PRKCH-216ENST00000555542 JRKLQ9Y4A0 524 aa23.64■■□□□ 1.37
PRKCH-216ENST00000555542 A0A0J9YY10 115 aa23.63■■□□□ 1.37
PRKCH-216ENST00000555542 TCRBV7S3A2A0A539 114 aa23.63■■□□□ 1.37
PRKCH-216ENST00000555542 MKRN2OSH3BPM6 223 aa23.63■■□□□ 1.37
PRKCH-216ENST00000555542 PFDN6O15212 129 aa23.63■■□□□ 1.37
PRKCH-216ENST00000555542 VAPBO95292 243 aa23.63■■□□□ 1.37
PRKCH-216ENST00000555542 RECKO95980 971 aa23.63■■□□□ 1.37
PRKCH-216ENST00000555542 KRT14P02533 472 aa23.63■■□□□ 1.37
PRKCH-216ENST00000555542 EIF3BP55884 814 aaKnown RBP23.63■■□□□ 1.37
PRKCH-216ENST00000555542 LACTB2Q53H82 288 aaPredicted RBP23.63■■□□□ 1.37
PRKCH-216ENST00000555542 MRNIPQ6NTE8 343 aa23.63■■□□□ 1.37
PRKCH-216ENST00000555542 SDCCAG8Q86SQ7 713 aaPredicted RBP23.63■■□□□ 1.37
PRKCH-216ENST00000555542 LRRC6Q86X45 466 aa23.63■■□□□ 1.37
PRKCH-216ENST00000555542 DSELQ8IZU8 1212 aa23.63■■□□□ 1.37
PRKCH-216ENST00000555542 MFSD3Q96ES6 412 aa23.63■■□□□ 1.37
PRKCH-216ENST00000555542 PBKQ96KB5 322 aa23.63■■□□□ 1.37
PRKCH-216ENST00000555542 MRM3Q9HC36 420 aaKnown RBP23.63■■□□□ 1.37
PRKCH-216ENST00000555542 KPNA5O15131 536 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 GPC4O75487 556 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 RFPL1O75677 317 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 HBQ1P09105 142 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 TPBGLP0DKB5 382 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 AOAHP28039 575 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 RAB28P51157 221 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 KIR2DS3Q14952 304 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 UGT8Q16880 541 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 DEFB110Q30KQ9 67 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 PLEKHS1Q5SXH7 462 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 IZUMO3Q5VZ72 239 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 TTC23LQ6PF05 361 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 UNC5DQ6UXZ4 953 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 OTOAQ7RTW8 1153 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 DCUN1D3Q8IWE4 304 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 SYTL1Q8IYJ3 562 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 MS4A14Q96JA4 679 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 NAP1L3Q99457 506 aaPredicted RBP23.62■■□□□ 1.37
PRKCH-216ENST00000555542 KIFC1Q9BW19 673 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 SAMD15Q9P1V8 674 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 CIDEBQ9UHD4 219 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 SLC39A10Q9ULF5 831 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms