RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 SPATA4Q8NEY3 305 aa12.04□□□□□ -0.48
TRAPPC6B-205ENST00000555269 OR5K2Q8NHB8 316 aa12.04□□□□□ -0.48
TRAPPC6B-205ENST00000555269 UBXN4Q92575 508 aa12.04□□□□□ -0.48
TRAPPC6B-205ENST00000555269 SLC30A3Q99726 388 aa12.04□□□□□ -0.48
TRAPPC6B-205ENST00000555269 EBNA1BP2Q99848 306 aaKnown RBP12.04□□□□□ -0.48
TRAPPC6B-205ENST00000555269 TSSK1BQ9BXA7 367 aa12.04□□□□□ -0.48
TRAPPC6B-205ENST00000555269 PLAC1Q9HBJ0 212 aa12.04□□□□□ -0.48
TRAPPC6B-205ENST00000555269 IARS2Q9NSE4 1012 aaKnown RBP12.04□□□□□ -0.48
TRAPPC6B-205ENST00000555269 POMT2Q9UKY4 750 aa12.04□□□□□ -0.48
TRAPPC6B-205ENST00000555269 RUVBL2Q9Y230 463 aaKnown RBP12.04□□□□□ -0.48
TRAPPC6B-205ENST00000555269 NFS1Q9Y697 457 aa12.04□□□□□ -0.48
TRAPPC6B-205ENST00000555269 KRT87PA6NCN2 255 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 TLCD2A6NGC4 264 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 EFCAB8A8MWE9 144 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 K7ENP7 123 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 RAD1O60671 282 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 SPAG6O75602 509 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 STK17BO94768 372 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 TIAF1O95411 115 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 PKMP14618 531 aaKnown RBP12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 PGAM1P18669 254 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 OGNP20774 298 aaKnown RBP12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 CDH3P22223 829 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 CD82P27701 267 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 ELK3P41970 407 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 ARL4DP49703 201 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 TMPRSS3P57727 454 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 HSD11B2P80365 405 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 MPP1Q00013 466 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 C2orf54Q08AI8 447 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 GRB7Q14451 532 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 IL11RAQ14626 422 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 GPR19Q15760 415 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 CCSMST1Q4G0I0 132 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 DNAJC21Q5F1R6 531 aaKnown RBP12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 MANEAQ5SRI9 462 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 KIAA1614Q5VZ46 1190 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 ARMC3Q5W041 872 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 INO80CQ6PI98 192 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 CNSTQ6PJW8 725 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 OTOAQ7RTW8 1153 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 TRIM73Q86UV7 250 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 HOOK3Q86VS8 718 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 RASGRP3Q8IV61 690 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 FAM20CQ8IXL6 584 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 CACNA2D3Q8IZS8 1091 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 D2HGDHQ8N465 521 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 SKA2Q8WVK7 121 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 RUNDC3BQ96NL0 473 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 IL17FQ96PD4 163 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 BBC3Q96PG8 261 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 TEFMQ96QE5 360 aaKnown RBP12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 PANX3Q96QZ0 392 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 OR2A14Q96R47 310 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 CD180Q99467 661 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 ZPBPQ9BS86 351 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 ACTR10Q9NZ32 417 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 POLG2Q9UHN1 485 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 FBXO5Q9UKT4 447 aa12.03□□□□□ -0.48
TRAPPC6B-205ENST00000555269 LOC101059948A0A1B0GTJ6 334 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PIPSLA2A3N6 862 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 C2orf74A8MZ97 194 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PFDN6O15212 129 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 KIAA0754O94854 1291 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 SEC31AO94979 1220 aaKnown RBP12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ZBTB11O95625 1053 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ESR1P03372 595 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 CHRM5P08912 532 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 FGF5P12034 268 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ST6GAL1P15907 406 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 UGT2B7P16662 529 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 GABRB3P28472 473 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 SLC1A2P43004 574 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 RPL21P46778 160 aaKnown RBP12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 CARSP49589 748 aaKnown RBP12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 UCNP55089 124 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ADARP55265 1226 aaKnown RBP12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 CYP4F2P78329 520 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TUBB3Q13509 450 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 COL9A2Q14055 689 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 CRYMQ14894 314 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 MORF4L2Q15014 288 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TMED2Q15363 201 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 KYNUQ16719 465 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 SOWAHCQ53LP3 525 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 ACSBG2Q5FVE4 666 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PLEKHS1Q5SXH7 462 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 RNF187Q5TA31 235 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PRAMEF17Q5VTA0 474 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 DMRTA1Q5VZB9 504 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 PWWP2BQ6NUJ5 590 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 KCNMB4Q86W47 210 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 IL22RA1Q8N6P7 574 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 GALNT6Q8NCL4 622 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 FLVCR1-AS1Q8TAF5 88 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 CFAP36Q96G28 342 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 SNF8Q96H20 258 aa12.02□□□□□ -0.49
TRAPPC6B-205ENST00000555269 TRAPPC9Q96Q05 1148 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms