RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 CENPLQ8N0S6 344 aaPredicted RBP9.38□□□□□ -0.91
SIX4-202ENST00000554079 CHCHD4Q8N4Q1 142 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 ZNF540Q8NDQ6 660 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 SETD9Q8NE22 299 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 SLC9A6Q92581 669 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 PHF21AQ96BD5 680 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 ITCHQ96J02 903 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 FAM129BQ96TA1 746 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 RACGAP1Q9H0H5 632 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 OR51E2Q9H255 320 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 ELOVL6Q9H5J4 265 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 C3orf14Q9HBI5 128 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 CYP4F12Q9HCS2 524 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 ANKEF1Q9NU02 776 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 KCMF1Q9P0J7 381 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 XPR1Q9UBH6 696 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 DNAJB9Q9UBS3 223 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 TJP2Q9UDY2 1190 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 TSR3Q9UJK0 312 aaKnown RBP9.38□□□□□ -0.91
SIX4-202ENST00000554079 PRR12Q9ULL5 1215 aa9.38□□□□□ -0.91
SIX4-202ENST00000554079 SIP14410 1827 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 PQLC2LA1A4F0 135 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 ERVV-1B6SEH8 477 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 NT5C1B-RDH14C9J2C7 533 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 GATCO43716 136 aaKnown RBP9.37□□□□□ -0.91
SIX4-202ENST00000554079 HUS1O60921 280 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 FAM20BO75063 409 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 C4BPAP04003 597 aaKnown RBP9.37□□□□□ -0.91
SIX4-202ENST00000554079 HMGCRP04035 888 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 CSF2P04141 144 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 DARSP14868 501 aaKnown RBP9.37□□□□□ -0.91
SIX4-202ENST00000554079 AZGP1P25311 298 aaKnown RBP9.37□□□□□ -0.91
SIX4-202ENST00000554079 SOX6P35712 828 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 NUP62P37198 522 aaPredicted RBP9.37□□□□□ -0.91
SIX4-202ENST00000554079 NRIP1P48552 1158 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 AKR1D1P51857 326 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 DNAJB13P59910 316 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 RRAS2P62070 204 aaPredicted RBP9.37□□□□□ -0.91
SIX4-202ENST00000554079 CLDN10P78369 228 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 SCN1BQ07699 218 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 NFIAQ12857 509 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 CSTF3Q12996 717 aaKnown RBP9.37□□□□□ -0.91
SIX4-202ENST00000554079 ETFDHQ16134 617 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 COL28A1Q2UY09 1125 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 CAPN13Q6MZZ7 669 aaPredicted RBP9.37□□□□□ -0.91
SIX4-202ENST00000554079 TMEM179BQ7Z7N9 219 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 CDKL3Q8IVW4 592 aaPredicted RBP9.37□□□□□ -0.91
SIX4-202ENST00000554079 SCUBE3Q8IX30 993 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 CYP4Z2PQ8N1L4 340 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 OR4D10Q8NGI6 311 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 NSMCE2Q96MF7 247 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 WDFY2Q96P53 400 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 GPR78Q96P69 363 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 SLC9A7Q96T83 725 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 AGAP2Q99490 1192 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 KCNS3Q9BQ31 491 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 ZNF518BQ9C0D4 1074 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 MCUBQ9NWR8 336 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 PIH1D1Q9NWS0 290 aaKnown RBP9.37□□□□□ -0.91
SIX4-202ENST00000554079 REV1Q9UBZ9 1251 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 ACAD8Q9UKU7 415 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 TBX20Q9UMR3 447 aa9.37□□□□□ -0.91
SIX4-202ENST00000554079 COL1A2P08123 1366 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 LOC100506127A0A0U1RQW1 187 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 SLC35F4A4IF30 521 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 ASPDHA6ND91 283 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 C9JVG2 144 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 APOL1O14791 398 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 MYL12BO14950 172 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 PLA2G10O15496 165 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 RGS20O76081 388 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 GLAP06280 429 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 FCER2P06734 321 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 MYL12AP19105 171 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 ZNF143P52747 638 aaPredicted RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 PGGT1BP53609 377 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 EIF6P56537 245 aaKnown RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 LARS2Q15031 903 aaKnown RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 ZNF124Q15973 351 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 NKG7Q16617 165 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 SAXO2Q658L1 398 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 SPESP1Q6UW49 350 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 BNIPLQ7Z465 357 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 KRT73Q86Y46 540 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 DCP1BQ8IZD4 617 aaKnown RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 GPR151Q8TDV0 419 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 IPCEF1Q8WWN9 437 aaPredicted RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 ASB12Q8WXK4 309 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 VPS39Q96JC1 886 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 MRGPRX2Q96LB1 330 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 PGLYRP2Q96PD5 576 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 MLPHQ9BV36 600 aaPredicted RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 TTYH1Q9H313 450 aaPredicted RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 POMKQ9H5K3 350 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 DYRK4Q9NR20 520 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 KCTD5Q9NXV2 234 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 ZNF112Q9UJU3 913 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 RUVBL2Q9Y230 463 aaKnown RBP9.36□□□□□ -0.91
SIX4-202ENST00000554079 MYLKQ15746 1914 aa9.36□□□□□ -0.91
SIX4-202ENST00000554079 TRIP11Q15643 1979 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 845.9 ms