RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	MRGBP	Q9NV56	204 aa		12.38	□□□□□ -0.43
CACNB3-223	ENST00000552480	DNAJC11	Q9NVH1	559 aa		12.38	□□□□□ -0.43
CACNB3-223	ENST00000552480	SLC23A2	Q9UGH3	650 aa		12.38	□□□□□ -0.43
CACNB3-223	ENST00000552480	ZNHIT2	Q9UHR6	403 aa		12.38	□□□□□ -0.43
CACNB3-223	ENST00000552480	PRKAB1	Q9Y478	270 aa		12.38	□□□□□ -0.43
CACNB3-223	ENST00000552480	CAPN7	Q9Y6W3	813 aa		12.38	□□□□□ -0.43
CACNB3-223	ENST00000552480	TRPM6	Q9BX84	2022 aa		12.38	□□□□□ -0.43
CACNB3-223	ENST00000552480	C19orf67	A6NJJ6	358 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	MYO1C	O00159	1063 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	DCX	O43602	365 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	KCNJ13	O60928	360 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	WDR47	O94967	919 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	CEACAM5	P06731	702 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	EBLN1	P0CF75	366 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	HGF	P14210	728 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	HNRNPA2B1	P22626	353 aa	Known RBP	12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	ACADL	P28330	430 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	PTPN4	P29074	926 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	OXTR	P30559	389 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	ADSL	P30566	484 aa	Predicted RBP	12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	AKT2	P31751	481 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	ARL1	P40616	181 aa	Predicted RBP	12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	CCR5	P51681	352 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	KLF10	Q13118	480 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	FZD5	Q13467	585 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	PTCHD3	Q3KNS1	767 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	FAM219B	Q5XKK7	198 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	METRNL	Q641Q3	311 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	RNF165	Q6ZSG1	346 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	LARP4	Q71RC2	724 aa	Known RBP eCLIP	12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	DDIAS	Q8IXT1	998 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	CDYL2	Q8N8U2	506 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	SNX31	Q8N9S9	440 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	TSTD1	Q8NFU3	115 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	KLHL29	Q96CT2	875 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	SCARF2	Q96GP6	870 aa	Predicted RBP	12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	C3orf30	Q96M34	536 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	CATSPER2	Q96P56	530 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	CDK15	Q96Q40	435 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	PKP4	Q99569	1192 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	MYOC	Q99972	504 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	SLC29A3	Q9BZD2	475 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	ZDHHC5	Q9C0B5	715 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	TUBB1	Q9H4B7	451 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	PRDM6	Q9NQX0	595 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	STOX2	Q9P2F5	926 aa	Predicted RBP	12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	BTRC	Q9Y297	605 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	TIMM22	Q9Y584	194 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	C5orf42	Q9H799	3197 aa		12.37	□□□□□ -0.43
CACNB3-223	ENST00000552480	ATG2B	Q96BY7	2078 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	FAM170B	A6NMN3	283 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	TOR1B	O14657	336 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	UBD	O15205	165 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	LAT	O43561	262 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	CAPN1	P07384	714 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	LINC00032	P0C843	101 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	KEL	P23276	732 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	IMPA1	P29218	277 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	HMOX2	P30519	316 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	ATP4B	P51164	291 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	PFN3	P60673	137 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	IRX1	P78414	480 aa	Predicted RBP	12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	GAS6	Q14393	721 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	SQLE	Q14534	574 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	NAA25	Q14CX7	972 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	ZXDC	Q2QGD7	858 aa	Predicted RBP	12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	CCSMST1	Q4G0I0	132 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	GGTA1P	Q4G0N0	100 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	XKR7	Q5GH72	579 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	TMEM31	Q5JXX7	168 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	TMEM198	Q66K66	360 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	KIAA0895L	Q68EN5	471 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	ANO7	Q6IWH7	933 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	AGTRAP	Q6RW13	159 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	GALNT13	Q8IUC8	556 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	SIX5	Q8N196	739 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	MAFA	Q8NHW3	353 aa	Predicted RBP	12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	METTL6	Q8TCB7	284 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	MAGEC3	Q8TD91	643 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	CMTM5	Q96DZ9	223 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	MAGEB10	Q96LZ2	347 aa	Predicted RBP	12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	UHRF1	Q96T88	793 aa	Predicted RBP	12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	AKTIP	Q9H8T0	292 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	TM7SF3	Q9NS93	570 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	RIC8B	Q9NVN3	520 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	POLG2	Q9UHN1	485 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	ACSL5	Q9ULC5	683 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	CYP8B1	Q9UNU6	501 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	PTGDR2	Q9Y5Y4	395 aa		12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	COPG1	Q9Y678	874 aa	Known RBP	12.36	□□□□□ -0.43
CACNB3-223	ENST00000552480	MYO10	Q9HD67	2058 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	KRT87P	A6NCN2	255 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	POM121B	A6NF01	834 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	IFRD1	O00458	451 aa	Predicted RBP	12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	CLDN9	O95484	217 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	APBB3	O95704	486 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	FUCA1	P04066	466 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	RPN2	P04844	631 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	NQO1	P15559	274 aa	Known RBP	12.35	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms