RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 LLPHQ9BRT6 129 aaKnown RBP4.1□□□□□ -1.75
USP44-208ENST00000552440 ATG10Q9H0Y0 220 aa4.1□□□□□ -1.75
USP44-208ENST00000552440 SLCO1C1Q9NYB5 712 aa4.1□□□□□ -1.75
USP44-208ENST00000552440 KLHL9Q9P2J3 617 aa4.1□□□□□ -1.75
USP44-208ENST00000552440 HSFX1Q9UBD0 423 aa4.1□□□□□ -1.75
USP44-208ENST00000552440 HACL1Q9UJ83 578 aa4.1□□□□□ -1.75
USP44-208ENST00000552440 SORCS3Q9UPU3 1222 aa4.1□□□□□ -1.75
USP44-208ENST00000552440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.1□□□□□ -1.75
USP44-208ENST00000552440 TRAV6A0A075B6T7 132 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 MAGEB16A2A368 324 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 RSPH10B2B2RC85 870 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 ATG13O75143 517 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 GPC4O75487 556 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 PDE9AO76083 593 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 CSTAP01040 98 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 FHP07954 510 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 SPATA31D3P0C874 917 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 RSPH10BP0C881 870 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 ODC1P11926 461 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 GJA1P17302 382 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 LBPP18428 481 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 UGT1A6P19224 532 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 EDN2P20800 178 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 U2AF2P26368 475 aaKnown RBP eCLIP4.09□□□□□ -1.75
USP44-208ENST00000552440 ACADLP28330 430 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 SLC6A12P48065 614 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 MTHFSP49914 203 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 DGKQP52824 942 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 B4GALNT1Q00973 533 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 MC2RQ01718 297 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 PPP1R8Q12972 351 aaKnown RBP4.09□□□□□ -1.75
USP44-208ENST00000552440 LAMB3Q13751 1172 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 KRT31Q15323 416 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 USP41Q3LFD5 358 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 ATP13A5Q4VNC0 1218 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 C10orf120Q5SQS8 335 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 LDLRAP1Q5SW96 308 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 METRNLQ641Q3 311 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 SPATA31D4Q6ZUB0 917 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 DET1Q7L5Y6 550 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 CENPLQ8N0S6 344 aaPredicted RBP4.09□□□□□ -1.75
USP44-208ENST00000552440 RNF148Q8N7C7 305 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 GOLGA5Q8TBA6 731 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 ISG20Q96AZ6 181 aaKnown RBP4.09□□□□□ -1.75
USP44-208ENST00000552440 LENG9Q96B70 501 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 TMEM68Q96MH6 324 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 LRFN5Q96NI6 719 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 PNKPQ96T60 521 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 MMTAG2Q9BU76 263 aaKnown RBP4.09□□□□□ -1.75
USP44-208ENST00000552440 VN1R3Q9BXE9 311 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 NSRP1Q9H0G5 558 aaKnown RBP4.09□□□□□ -1.75
USP44-208ENST00000552440 NAPBQ9H115 298 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 HIPK3Q9H422 1215 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 DCTPP1Q9H773 170 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 KCNMB3Q9NPA1 279 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 GPR108Q9NPR9 543 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 OR6C2Q9NZP2 312 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 SPATA7Q9P0W8 599 aa4.09□□□□□ -1.75
USP44-208ENST00000552440 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.09□□□□□ -1.75
USP44-208ENST00000552440 NPC1L1Q9UHC9 1359 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 TTC26A0AVF1 554 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 C17orf102A2RUQ5 167 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 MAGEA13PA6NCF6 341 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 HELTA6NFD8 242 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 TRIM77I1YAP6 450 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 CTDSPLO15194 276 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 OGTO15294 1046 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 MAGEB2O15479 319 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 OGG1O15527 345 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 SUN1O94901 812 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 TFP02787 698 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 ZNF182P17025 639 aaPredicted RBP4.09□□□□□ -1.76
USP44-208ENST00000552440 CYP11B2P19099 503 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 ATP6V1C1P21283 382 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 EEF1B2P24534 225 aaKnown RBP4.09□□□□□ -1.76
USP44-208ENST00000552440 HOXD9P28356 352 aaPredicted RBP4.09□□□□□ -1.76
USP44-208ENST00000552440 PPIFP30405 207 aaKnown RBP4.09□□□□□ -1.76
USP44-208ENST00000552440 CXCR5P32302 372 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 IGHMBP2P38935 993 aaKnown RBP4.09□□□□□ -1.76
USP44-208ENST00000552440 MMP13P45452 471 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 CSNK2BP67870 215 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 COTL1Q14019 142 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 DRAP1Q14919 205 aaPredicted RBP4.09□□□□□ -1.76
USP44-208ENST00000552440 GPR162Q16538 588 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 DECR1Q16698 335 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 EDRF1Q3B7T1 1238 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.09□□□□□ -1.76
USP44-208ENST00000552440 SPOUT1Q5T280 376 aaKnown RBP4.09□□□□□ -1.76
USP44-208ENST00000552440 LRIF1Q5T3J3 769 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 GRHL2Q6ISB3 625 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 RGS7BPQ6MZT1 257 aaPredicted RBP4.09□□□□□ -1.76
USP44-208ENST00000552440 ACSM6Q6P461 480 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 DLEU7Q6UYE1 221 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 EFL1Q7Z2Z2 1120 aaKnown RBP4.09□□□□□ -1.76
USP44-208ENST00000552440 CAMK1DQ8IU85 385 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 GRAMD2AQ8IUY3 354 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 NKAIN4Q8IVV8 208 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 GHDCQ8N2G8 530 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 DNAAF1Q8NEP3 725 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms