RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 OGFRQ9NZT2 677 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 TMEM9Q9P0T7 183 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 TXNDC16Q9P2K2 825 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 GALPQ9UBC7 116 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 KLHL3Q9UH77 587 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 SATB2Q9UPW6 733 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 TDRKHQ9Y2W6 561 aaKnown RBP10.33□□□□□ -0.76
PTCH1-225ENST00000551845 VWA7Q9Y334 891 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 DHRS7Q9Y394 339 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 LOXL2Q9Y4K0 774 aa10.33□□□□□ -0.76
PTCH1-225ENST00000551845 APC2O95996 2303 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 OR5K3A6NET4 321 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 AGRPO00253 132 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 MATN2O00339 956 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 RRP8O43159 456 aaKnown RBP10.32□□□□□ -0.76
PTCH1-225ENST00000551845 SPAG6O75602 509 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 RASSF9O75901 435 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 TNFSF15O95150 251 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 C9P02748 559 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 F7P08709 466 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-225ENST00000551845 CBSLP0DN79 551 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 THRAP10827 490 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 ATP5DP30049 168 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 CSF2RBP32927 897 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 CBSP35520 551 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 MLLT3P42568 568 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-225ENST00000551845 CAPZBP47756 277 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 TUBB4BP68371 445 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 CUL1Q13616 776 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 KLHL38Q2WGJ6 581 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 TMEM164Q5U3C3 297 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 CACHD1Q5VU97 1274 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 NEK10Q6ZWH5 1172 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 ARHGAP22Q7Z5H3 698 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 RAB42Q8N4Z0 105 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 SIDT2Q8NBJ9 832 aaKnown RBP10.32□□□□□ -0.76
PTCH1-225ENST00000551845 LSM14AQ8ND56 463 aaKnown RBP10.32□□□□□ -0.76
PTCH1-225ENST00000551845 RCBTB1Q8NDN9 531 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 OR5AR1Q8NGP9 310 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 RSC1A1Q92681 617 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 RAD51AP1Q96B01 352 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 GPR21Q99679 349 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 LRRC4CQ9HCJ2 640 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 TRMT6Q9UJA5 497 aaKnown RBP10.32□□□□□ -0.76
PTCH1-225ENST00000551845 SLC39A10Q9ULF5 831 aa10.32□□□□□ -0.76
PTCH1-225ENST00000551845 CORO1CQ9ULV4 474 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-225ENST00000551845 HELZ2Q9BYK8 2649 aaKnown RBP10.31□□□□□ -0.76
PTCH1-225ENST00000551845 TCRBV9S1A1TA0A576 114 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 MAP3K7O43318 606 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 ZBTB14O43829 449 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 MATN4O95460 622 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 C1orf105O95561 183 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 RHOXF2BP0C7M4 288 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 MPC1LP0DKB6 136 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 ENO3P13929 434 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-225ENST00000551845 POLR2CP19387 275 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-225ENST00000551845 CD9P21926 228 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 STX2P32856 288 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 SHMT2P34897 504 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 PHBP35232 272 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 CCNFP41002 786 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 ARL4DP49703 201 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 RGS4P49798 205 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 GFERP55789 205 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 GPX6P59796 221 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 ERVPABLB-1P60509 514 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 C16orf72Q14CZ0 275 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 KYNUQ16719 465 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 ACSBG2Q5FVE4 666 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 HECTD2Q5U5R9 776 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 LRRC8EQ6NSJ5 796 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 FAM45BPQ6NSW5 357 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 IGF2-ASQ6U949 168 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 FAM92BQ6ZTR7 304 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 RELL1Q8IUW5 271 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 DCUN1D3Q8IWE4 304 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 CTAGE3PQ8IX95 158 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 GPATCH11Q8N954 259 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 FAM45AQ8TCE6 357 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 UBXN4Q92575 508 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 VPS39Q96JC1 886 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 ZNF578Q96N58 590 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-225ENST00000551845 CD180Q99467 661 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 FMO2Q99518 471 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 NDNQ99608 321 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 RHOXF2Q9BQY4 288 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 HGH1Q9BTY7 390 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 XKR8Q9H6D3 395 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 THSD1Q9NS62 852 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 OR6C2Q9NZP2 312 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 PISDQ9UG56 409 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 LNPEPQ9UIQ6 1025 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 MED16Q9Y2X0 877 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 KNTC1P50748 2209 aa10.31□□□□□ -0.76
PTCH1-225ENST00000551845 GOLGA4Q13439 2230 aaKnown RBP10.31□□□□□ -0.76
PTCH1-225ENST00000551845 ASXL3Q9C0F0 2248 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 BPTFQ12830 3046 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 PIPSLA2A3N6 862 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 GSAPA4D1B5 854 aa10.3□□□□□ -0.76
PTCH1-225ENST00000551845 EFCAB7A8K855 629 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms