RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 PRMT7Q9NVM4 692 aaPredicted RBP4.69□□□□□ -1.66
LIMA1-205ENST00000550592 RHCGQ9UBD6 479 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 DLGAP4Q9Y2H0 992 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 NME7Q9Y5B8 376 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 CEP162Q5TB80 1403 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 CACNA1IQ9P0X4 2223 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 SBF2Q86WG5 1849 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 A0A0B4J293 547 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 A0A1W2PPM1 405 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 CTAGE9A4FU28 777 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 ANKUB1A6NFN9 424 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 C5orf60A6NFR6 353 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 TMEM178BH3BS89 294 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 EIF3DO15371 548 aaKnown RBP eCLIP4.68□□□□□ -1.66
LIMA1-205ENST00000550592 XRCC3O43542 346 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 BMP10O95393 424 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 GCNT3O95395 438 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 PPP1R3DO95685 299 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 CTAGE8P0CG41 777 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 GLULP15104 373 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 ZNF23P17027 643 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 AMPHP49418 695 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 TFCP2Q12800 502 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 ZBTB17Q13105 803 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 PTPRCAPQ14761 206 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 IL27RAQ6UWB1 636 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 RAD9BQ6WBX8 426 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 CTAGE4Q8IX94 777 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 MUC20Q8N307 709 aaPredicted RBP4.68□□□□□ -1.66
LIMA1-205ENST00000550592 GBGT1Q8N5D6 347 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 PI4KAP1Q8N8J0 262 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 ZNF441Q8N8Z8 693 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 KCNH5Q8NCM2 988 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 OR2AJ1Q8NGZ0 328 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 BBS10Q8TAM1 723 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 ZNF582Q96NG8 517 aaPredicted RBP4.68□□□□□ -1.66
LIMA1-205ENST00000550592 NAA11Q9BSU3 229 aaPredicted RBP4.68□□□□□ -1.66
LIMA1-205ENST00000550592 NUP85Q9BW27 656 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 CSTL1Q9H114 145 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 WNT5BQ9H1J7 359 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 OPA3Q9H6K4 179 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 CNOT10Q9H9A5 744 aaKnown RBP4.68□□□□□ -1.66
LIMA1-205ENST00000550592 CD93Q9NPY3 652 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 NPAP1Q9NZP6 1156 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 C10orf71Q711Q0 1435 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 NRXN3Q9Y4C0 1643 aa4.68□□□□□ -1.66
LIMA1-205ENST00000550592 KIF1AQ12756 1690 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 CDC42BPGQ6DT37 1551 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 BCL9O00512 1426 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 PRSS51A0A1B0GVH4 220 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 FEZF1A0PJY2 475 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 GPR137BO60478 399 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 TBCAO75347 108 aaKnown RBP4.67□□□□□ -1.66
LIMA1-205ENST00000550592 RECQL5O94762 991 aaPredicted RBP4.67□□□□□ -1.66
LIMA1-205ENST00000550592 SLCO2B1O94956 709 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 SCG2P13521 617 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 ERCC2P18074 760 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 TNFRSF8P28908 595 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 ZNF75DP51815 510 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 MAP2K1Q02750 393 aaPredicted RBP4.67□□□□□ -1.66
LIMA1-205ENST00000550592 HSPB3Q12988 150 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 CAMK2DQ13557 499 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 SLC39A14Q15043 492 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 KRBOX4Q5JUW0 171 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 OR7E24Q6IFN5 339 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 C16orf82Q7Z2V1 217 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 ARMC9Q7Z3E5 817 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 CENPVQ7Z7K6 275 aaPredicted RBP4.67□□□□□ -1.66
LIMA1-205ENST00000550592 RBM23Q86U06 439 aaKnown RBP4.67□□□□□ -1.66
LIMA1-205ENST00000550592 SFR1Q86XK3 245 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 RDM1Q8NG50 284 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 ATL1Q8WXF7 558 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 SECISBP2LQ93073 1101 aaKnown RBP4.67□□□□□ -1.66
LIMA1-205ENST00000550592 NXNL1Q96CM4 212 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 MED30Q96HR3 178 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 FER1L6-AS2Q96M78 137 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 TTC14Q96N46 770 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 LRRC3BQ96PB8 259 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 SLC25A23Q9BV35 468 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 MALT1Q9UDY8 824 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 RALYQ9UKM9 306 aaKnown RBP4.67□□□□□ -1.66
LIMA1-205ENST00000550592 IGSF1Q8N6C5 1336 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 TOPAZ1Q8N9V7 1692 aa4.67□□□□□ -1.66
LIMA1-205ENST00000550592 BRD4O60885 1362 aaPredicted RBP4.66□□□□□ -1.66
LIMA1-205ENST00000550592 COL24A1Q17RW2 1714 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 ABCA3Q99758 1704 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 NAIPQ13075 1403 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 SSH2Q76I76 1423 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 IGHV4OR15-8A0A075B7B6 117 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 ELOVL7A1L3X0 281 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 TMEM221A6NGB7 291 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 LACTBL1A8MY62 500 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 OR10H2O60403 315 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 CELF2O95319 508 aaKnown RBP4.66□□□□□ -1.66
LIMA1-205ENST00000550592 TFAP2AP05549 437 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 SNHG28P0DPA3 235 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 CDH1P12830 882 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 ACHEP22303 614 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 PTAFRP25105 342 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 PCGF2P35227 344 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms