RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 PEBP1P30086 187 aaKnown RBP12.99□□□□□ -0.33
GCN1-206ENST00000549815 CCR7P32248 378 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 SHMT2P34897 504 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 RPL22P35268 128 aaKnown RBP12.99□□□□□ -0.33
GCN1-206ENST00000549815 PLOD1Q02809 727 aaPredicted RBP12.99□□□□□ -0.33
GCN1-206ENST00000549815 SNX1Q13596 522 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 BRD3Q15059 726 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 COLEC12Q5KU26 742 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 LYPLAL1Q5VWZ2 237 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 CPZQ66K79 652 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 DRICH1Q6PGQ1 229 aaPredicted RBP12.99□□□□□ -0.33
GCN1-206ENST00000549815 FAM198BQ6UWH4 519 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 PPP1R21Q6ZMI0 780 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 ZNF662Q6ZS27 426 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 ENDOVQ8N8Q3 282 aaKnown RBP12.99□□□□□ -0.33
GCN1-206ENST00000549815 C19orf47Q8N9M1 422 aaKnown RBP12.99□□□□□ -0.33
GCN1-206ENST00000549815 OR4L1Q8NH43 312 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 LKAAEAR1Q8TD35 194 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 MENTQ9BUN1 341 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 AP1M1Q9BXS5 423 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 NLNQ9BYT8 704 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 ACTR5Q9H9F9 607 aaPredicted RBP12.99□□□□□ -0.33
GCN1-206ENST00000549815 MLXIPLQ9NP71 852 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 PAK5Q9P286 719 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 POLG2Q9UHN1 485 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 TCAF1Q9Y4C2 921 aa12.99□□□□□ -0.33
GCN1-206ENST00000549815 TNRC6AQ8NDV7 1962 aaKnown RBP12.99□□□□□ -0.33
GCN1-206ENST00000549815 CYSRT1A8MQ03 144 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 ARHGAP6O43182 974 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 GPC4O75487 556 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 GAS8O95995 478 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 CHRM5P08912 532 aaPredicted RBP12.98□□□□□ -0.33
GCN1-206ENST00000549815 CYP2A7P20853 494 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 ITGA1P56199 1179 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 CHAF1BQ13112 559 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 RPS6KA1Q15418 735 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 IGFBP7Q16270 282 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 CCNG2Q16589 344 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 FAM69BQ5VUD6 431 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 ASB18Q6ZVZ8 466 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 NLRP9Q7RTR0 991 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 TRIM73Q86UV7 250 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 VRK3Q8IV63 474 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 SYTL1Q8IYJ3 562 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 SLC22A15Q8IZD6 547 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.98□□□□□ -0.33
GCN1-206ENST00000549815 CLIP3Q96DZ5 547 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 CARD6Q9BX69 1037 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 EIF2B3Q9NR50 452 aaKnown RBP12.98□□□□□ -0.33
GCN1-206ENST00000549815 OR6C2Q9NZP2 312 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 SERTAD3Q9UJW9 196 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 TCFL5Q9UL49 500 aa12.98□□□□□ -0.33
GCN1-206ENST00000549815 DRG1Q9Y295 367 aaKnown RBP12.98□□□□□ -0.33
GCN1-206ENST00000549815 NBPF19A0A087WUL8 3843 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 ARGFXA6NJG6 315 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 E7EQ34 232 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 E7EVH7 732 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 ZNF749O43361 778 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 CEACAM4O75871 244 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 APRTP07741 180 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 CTSBP07858 339 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 PTGIRP43119 386 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 GRB7Q14451 532 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 SLC5A12Q1EHB4 618 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 PTCHD3Q3KNS1 767 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 SYTL3Q4VX76 610 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 FASTKD1Q53R41 847 aaKnown RBP12.97□□□□□ -0.33
GCN1-206ENST00000549815 PCID2Q5JVF3 399 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 PAPD7Q5XG87 772 aaKnown RBP12.97□□□□□ -0.33
GCN1-206ENST00000549815 LDB1Q86U70 411 aaPredicted RBP12.97□□□□□ -0.33
GCN1-206ENST00000549815 CCDC89Q8N998 374 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 OR6P1Q8NGX9 317 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 MIB2Q96AX9 1013 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 TCTN2Q96GX1 697 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 CHRAC1Q9NRG0 131 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 TREX1Q9NSU2 369 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 MARCH4Q9P2E8 410 aaPredicted RBP12.97□□□□□ -0.33
GCN1-206ENST00000549815 PLAGL1Q9UM63 463 aa12.97□□□□□ -0.33
GCN1-206ENST00000549815 TDRKHQ9Y2W6 561 aaKnown RBP12.97□□□□□ -0.33
GCN1-206ENST00000549815 PCDHGA9Q9Y5G4 932 aaKnown RBP12.97□□□□□ -0.33
GCN1-206ENST00000549815 A0A0J9YY10 115 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 CLEC18AA5D8T8 446 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 IQCF5A8MTL0 148 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 HBQ1P09105 142 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 PKLRP30613 574 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 CD97P48960 835 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 CSE1LP55060 971 aaKnown RBP12.96□□□□□ -0.33
GCN1-206ENST00000549815 PRAMEP78395 509 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 KIR2DS3Q14952 304 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 NCF4Q15080 339 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 KYNUQ16719 465 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 DEFB110Q30KQ9 67 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 DNAJC21Q5F1R6 531 aaKnown RBP12.96□□□□□ -0.33
GCN1-206ENST00000549815 CLEC18BQ6UXF7 455 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 DNAJC22Q8N4W6 341 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 ZBTB2Q8N680 514 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 TEX19Q8NA77 164 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 LINC01555Q8NAE3 123 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 CLEC18CQ8NCF0 446 aa12.96□□□□□ -0.33
GCN1-206ENST00000549815 PPHLN1Q8NEY8 458 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms