RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 SPEGQ15772 3267 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 RP1P56715 2156 aa20.61■□□□□ 0.89
VPS29-206ENST00000549578 CASC3O15234 703 aaKnown RBP20.61■□□□□ 0.89
VPS29-206ENST00000549578 ZBTB14O43829 449 aa20.61■□□□□ 0.89
VPS29-206ENST00000549578 C8GP07360 202 aa20.61■□□□□ 0.89
VPS29-206ENST00000549578 LTA4HP09960 611 aaKnown RBP20.61■□□□□ 0.89
VPS29-206ENST00000549578 TPBGLP0DKB5 382 aa20.61■□□□□ 0.89
VPS29-206ENST00000549578 PYGBP11216 843 aa20.61■□□□□ 0.89
VPS29-206ENST00000549578 ACP1P24666 158 aa20.61■□□□□ 0.89
VPS29-206ENST00000549578 ALDH4A1P30038 563 aa20.61■□□□□ 0.89
VPS29-206ENST00000549578 MAPK9P45984 424 aa20.61■□□□□ 0.89
VPS29-206ENST00000549578 ACADVLP49748 655 aa20.61■□□□□ 0.89
VPS29-206ENST00000549578 PLCL1Q15111 1095 aa20.61■□□□□ 0.89
VPS29-206ENST00000549578 TSNQ15631 228 aaKnown RBP20.61■□□□□ 0.89
VPS29-206ENST00000549578 TRIP6Q15654 476 aaKnown RBP20.61■□□□□ 0.89
VPS29-206ENST00000549578 CCDC91Q7Z6B0 441 aa20.61■□□□□ 0.89
VPS29-206ENST00000549578 RBM12BQ8IXT5 1001 aaKnown RBP20.61■□□□□ 0.89
VPS29-206ENST00000549578 PLD6Q8N2A8 252 aaKnown RBP20.61■□□□□ 0.89
VPS29-206ENST00000549578 CCDC3Q9BQI4 270 aa20.61■□□□□ 0.89
VPS29-206ENST00000549578 PCNX2A6NKB5 2137 aa20.61■□□□□ 0.89
VPS29-206ENST00000549578 CSRP1P21291 193 aaKnown RBP20.6■□□□□ 0.89
VPS29-206ENST00000549578 SLC26A3P40879 764 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 CCNFP41002 786 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 OR1D5P58170 312 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 SP140Q13342 867 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 GRB7Q14451 532 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 PHKG1Q16816 387 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 CCDC157Q569K6 752 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 TTC23LQ6PF05 361 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 HDXQ7Z353 690 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 CNPY4Q8N129 248 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 ZFPM2Q8WW38 1151 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 PTERQ96BW5 349 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.6■□□□□ 0.89
VPS29-206ENST00000549578 CENPHQ9H3R5 247 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 XKR8Q9H6D3 395 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 UCK1Q9HA47 277 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 ZNF358Q9NW07 568 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 POLG2Q9UHN1 485 aa20.6■□□□□ 0.89
VPS29-206ENST00000549578 LILRA5A6NI73 299 aa20.59■□□□□ 0.89
VPS29-206ENST00000549578 SYF2O95926 243 aaKnown RBP20.59■□□□□ 0.89
VPS29-206ENST00000549578 MAP4P27816 1152 aaKnown RBP20.59■□□□□ 0.89
VPS29-206ENST00000549578 GLRBP48167 497 aa20.59■□□□□ 0.89
VPS29-206ENST00000549578 ATP6V0D1P61421 351 aa20.59■□□□□ 0.89
VPS29-206ENST00000549578 NR1D2Q14995 579 aa20.59■□□□□ 0.89
VPS29-206ENST00000549578 SBSNQ6UWP8 590 aa20.59■□□□□ 0.89
VPS29-206ENST00000549578 SPRED1Q7Z699 444 aa20.59■□□□□ 0.89
VPS29-206ENST00000549578 ANKRD7Q92527 254 aa20.59■□□□□ 0.89
VPS29-206ENST00000549578 RAD51AP1Q96B01 352 aa20.59■□□□□ 0.89
VPS29-206ENST00000549578 CABS1Q96KC9 395 aa20.59■□□□□ 0.89
VPS29-206ENST00000549578 IL17FQ96PD4 163 aa20.59■□□□□ 0.89
VPS29-206ENST00000549578 SLC12A9Q9BXP2 914 aa20.59■□□□□ 0.89
VPS29-206ENST00000549578 PARVBQ9HBI1 364 aa20.59■□□□□ 0.89
VPS29-206ENST00000549578 KCNK4Q9NYG8 393 aa20.59■□□□□ 0.89
VPS29-206ENST00000549578 ICKQ9UPZ9 632 aa20.59■□□□□ 0.89
VPS29-206ENST00000549578 PDE10AQ9Y233 779 aa20.59■□□□□ 0.89
VPS29-206ENST00000549578 SPAARA0A1B0GVQ0 90 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 GIPC1O14908 333 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 SLC16A5O15375 505 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 RGS16O15492 202 aaPredicted RBP20.58■□□□□ 0.89
VPS29-206ENST00000549578 B4GAT1O43505 415 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 KLHL2O95198 593 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 PNLIPP16233 465 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 TFEBP19484 476 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 CYP2A7P20853 494 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 GPR3P46089 330 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 OR4D1Q15615 310 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 FAM83EQ2M2I3 478 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 GLRX5Q86SX6 157 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 CLEC14AQ86T13 490 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 TRABD2AQ86V40 505 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 OR4E2Q8NGC2 313 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 MAGEC3Q8TD91 643 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 ACMSDQ8TDX5 336 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 LCN9Q8WX39 176 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 GPR78Q96P69 363 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 RUFY1Q96T51 708 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 ALG9Q9H6U8 611 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 NMRAL1Q9HBL8 299 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 TOR4AQ9NXH8 423 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 UTP6Q9NYH9 597 aaKnown RBP20.58■□□□□ 0.89
VPS29-206ENST00000549578 ANKRD12Q6UB98 2062 aa20.58■□□□□ 0.89
VPS29-206ENST00000549578 MYO1CO00159 1063 aa20.58■□□□□ 0.88
VPS29-206ENST00000549578 TYRP1P17643 537 aa20.58■□□□□ 0.88
VPS29-206ENST00000549578 NOVA1P51513 510 aaKnown RBP20.58■□□□□ 0.88
VPS29-206ENST00000549578 PPP1R3AQ16821 1122 aa20.58■□□□□ 0.88
VPS29-206ENST00000549578 AMZ1Q400G9 498 aa20.58■□□□□ 0.88
VPS29-206ENST00000549578 NKAIN2Q5VXU1 208 aa20.58■□□□□ 0.88
VPS29-206ENST00000549578 MBOAT1Q6ZNC8 495 aa20.58■□□□□ 0.88
VPS29-206ENST00000549578 SH2D5Q6ZV89 423 aa20.58■□□□□ 0.88
VPS29-206ENST00000549578 ADAMTSL2Q86TH1 951 aa20.58■□□□□ 0.88
VPS29-206ENST00000549578 ISCA2Q86U28 154 aa20.58■□□□□ 0.88
VPS29-206ENST00000549578 SRRM1Q8IYB3 904 aaKnown RBP20.58■□□□□ 0.88
VPS29-206ENST00000549578 C4orf33Q8N1A6 199 aa20.58■□□□□ 0.88
VPS29-206ENST00000549578 LMNTD1Q8N9Z9 388 aa20.58■□□□□ 0.88
VPS29-206ENST00000549578 FBXO15Q8NCQ5 510 aaPredicted RBP20.58■□□□□ 0.88
VPS29-206ENST00000549578 OR9A1PQ8NGU1 263 aa20.58■□□□□ 0.88
VPS29-206ENST00000549578 MCOLN3Q8TDD5 553 aa20.58■□□□□ 0.88
VPS29-206ENST00000549578 KIAA1191Q96A73 305 aa20.58■□□□□ 0.88
VPS29-206ENST00000549578 PKP4Q99569 1192 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms