RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SLC4A4Q9Y6R1 1079 aa4.14□□□□□ -1.75
SCAF11-210ENST00000547654 ATP8B3O60423 1300 aa4.14□□□□□ -1.75
SCAF11-210ENST00000547654 FRMPD1Q5SYB0 1578 aa4.14□□□□□ -1.75
SCAF11-210ENST00000547654 NOTCH4Q99466 2003 aa4.14□□□□□ -1.75
SCAF11-210ENST00000547654 CLEC18AA5D8T8 446 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 C5orf52A6NGY3 159 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 SDR42E2A6NKP2 422 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 FOXO6A8MYZ6 492 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 K7EPI3 171 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 MEIS2O14770 477 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 SMPD2O60906 423 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 KCNK5O95279 499 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 IFNB1P01574 187 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 ABHD2P08910 425 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 SBK2P0C263 348 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 MYZAPP0CAP1 466 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 DDX5P17844 614 aaKnown RBP4.13□□□□□ -1.75
SCAF11-210ENST00000547654 CCND3P30281 292 aaPredicted RBP4.13□□□□□ -1.75
SCAF11-210ENST00000547654 GABRA5P31644 462 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 METAP2P50579 478 aaKnown RBP eCLIP4.13□□□□□ -1.75
SCAF11-210ENST00000547654 CDK3Q00526 305 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 SPOCK1Q08629 439 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 LPIN1Q14693 890 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 NR1D2Q14995 579 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 IQCCQ4KMZ1 466 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 AARDQ4LEZ3 155 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 ENTPD8Q5MY95 495 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 PIK3CD-AS1Q5SR53 167 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 TEX35Q5T0J7 233 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 SPOUT1Q5T280 376 aaKnown RBP4.13□□□□□ -1.75
SCAF11-210ENST00000547654 KDELC1Q6UW63 502 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 TPRG1Q6ZUI0 275 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 CAMK1DQ8IU85 385 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 SIAH3Q8IW03 269 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 FAM219AQ8IW50 185 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 DDIASQ8IXT1 998 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 KDM8Q8N371 416 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 CLEC18CQ8NCF0 446 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 UBLCP1Q8WVY7 318 aaPredicted RBP4.13□□□□□ -1.75
SCAF11-210ENST00000547654 ADAMTS14Q8WXS8 1223 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 NSMAFQ92636 917 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 OTUB1Q96FW1 271 aaPredicted RBP4.13□□□□□ -1.75
SCAF11-210ENST00000547654 RBM18Q96H35 190 aaKnown RBP4.13□□□□□ -1.75
SCAF11-210ENST00000547654 GDAP1L1Q96MZ0 367 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 SFXN2Q96NB2 322 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 MUS81Q96NY9 551 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 KLHL5Q96PQ7 755 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 OLFM1Q99784 485 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 TEX13BQ9BXU2 312 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 OSBPL8Q9BZF1 889 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 TBC1D17Q9HA65 648 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 PNRC2Q9NPJ4 139 aaKnown RBP4.13□□□□□ -1.75
SCAF11-210ENST00000547654 AATFQ9NY61 560 aaKnown RBP eCLIP4.13□□□□□ -1.75
SCAF11-210ENST00000547654 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.13□□□□□ -1.75
SCAF11-210ENST00000547654 TBC1D7Q9P0N9 293 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 GMEB2Q9UKD1 530 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 RCOR1Q9UKL0 485 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 TTC7AQ9ULT0 858 aaPredicted RBP4.13□□□□□ -1.75
SCAF11-210ENST00000547654 LAMP3Q9UQV4 416 aa4.13□□□□□ -1.75
SCAF11-210ENST00000547654 ZNF335Q9H4Z2 1342 aaPredicted RBP4.13□□□□□ -1.75
SCAF11-210ENST00000547654 SOGA1O94964 1423 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 PLB1Q6P1J6 1458 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 TOP2AP11388 1531 aaKnown RBP4.12□□□□□ -1.75
SCAF11-210ENST00000547654 ARHGEF40Q8TER5 1519 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 HSPB6O14558 160 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 RASGRF2O14827 1237 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 SSX4O60224 188 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 SELENOFO60613 162 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 HSF2BPO75031 334 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 PEX11AO75192 247 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 LUC7L3O95232 432 aaKnown RBP4.12□□□□□ -1.75
SCAF11-210ENST00000547654 CLDN7O95471 211 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 EGFP01133 1207 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 CYC1P08574 325 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 RAB40ALP0C0E4 278 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 PLA2G4BP0C869 781 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 KRT13P13646 458 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 ENO3P13929 434 aaPredicted RBP4.12□□□□□ -1.75
SCAF11-210ENST00000547654 MYL6BP14649 208 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 CYP11B2P19099 503 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 AHCYP23526 432 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 CD27P26842 260 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 DCTDP32321 178 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 ACAA2P42765 397 aaKnown RBP4.12□□□□□ -1.75
SCAF11-210ENST00000547654 ALDH7A1P49419 539 aaKnown RBP4.12□□□□□ -1.75
SCAF11-210ENST00000547654 ASCL1P50553 236 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 ADARP55265 1226 aaKnown RBP4.12□□□□□ -1.75
SCAF11-210ENST00000547654 PTENP60484 403 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 GRIK2Q13002 908 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 TRA2AQ13595 282 aaKnown RBP eCLIP4.12□□□□□ -1.75
SCAF11-210ENST00000547654 MVPQ14764 893 aaKnown RBP4.12□□□□□ -1.75
SCAF11-210ENST00000547654 SGCBQ16585 318 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 DCAF6Q58WW2 860 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.12□□□□□ -1.75
SCAF11-210ENST00000547654 TXNRD3NBQ6F5E7 133 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 MFSD7Q6UXD7 560 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 RBM43Q6ZSC3 357 aaKnown RBP4.12□□□□□ -1.75
SCAF11-210ENST00000547654 EXOC3L1Q86VI1 746 aa4.12□□□□□ -1.75
SCAF11-210ENST00000547654 MB21D2Q8IYB1 491 aaPredicted RBP4.12□□□□□ -1.75
SCAF11-210ENST00000547654 DSELQ8IZU8 1212 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms