RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 SGCGQ13326 291 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 PTPRRQ15256 657 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 RCN1Q15293 331 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 ZNF678Q5SXM1 525 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 ZNF549Q6P9A3 640 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 FBXW8Q8N3Y1 598 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 OXR1Q8N573 874 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 OR4K2Q8NGD2 314 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 CXorf40AQ8TE69 158 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 ANKRD49Q8WVL7 239 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 WDR60Q8WVS4 1066 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 LPGAT1Q92604 370 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 SCNM1Q9BWG6 230 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 NUF2Q9BZD4 464 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 ZBTB26Q9HCK0 441 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 KLK13Q9UKR3 277 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 CRYL1Q9Y2S2 319 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 PCDHB9Q9Y5E1 797 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 PTPRBP23467 1997 aa16.92■□□□□ 0.3
RBFOX1-207ENST00000547338 YKT6O15498 198 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 FZD6O60353 706 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 VPS4BO75351 444 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 VPS26AO75436 327 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 MTTPP55157 894 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 AGERQ15109 404 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 IRF4Q15306 451 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 WSCD2Q2TBF2 565 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 ZNF542PQ5EBM4 170 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 LYPLAL1Q5VWZ2 237 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 RIPOR1Q6ZS17 1223 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 EFL1Q7Z2Z2 1120 aaKnown RBP16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 CUZD1Q86UP6 607 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 CHCHD4Q8N4Q1 142 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 ADAMTS14Q8WXS8 1223 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 CDC6Q99741 560 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 C1QTNF3Q9BXJ4 246 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 GSTO2Q9H4Y5 243 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 SUDS3Q9H7L9 328 aaPredicted RBP16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 TRAF6Q9Y4K3 522 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 OAS3Q9Y6K5 1087 aaKnown RBP16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 MYLKQ15746 1914 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 PLXNB3Q9ULL4 1909 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 STX16-NPEPL1H3BU86 382 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 TRIM38O00635 465 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 SDHDO14521 159 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 STX16O14662 325 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 FPGTO14772 594 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 ZZEF1O43149 2961 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 KERAO60938 352 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 SRP72O76094 671 aaKnown RBP16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 ESR1P03372 595 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 PKMP14618 531 aaKnown RBP16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 ACADSP16219 412 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 ITGAXP20702 1163 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 DGKAP23743 735 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 EPHA3P29320 983 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 RABIFP47224 123 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 SLC25A3Q00325 362 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 EIF2B5Q13144 721 aaKnown RBP16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 CUL3Q13618 768 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 SQLEQ14534 574 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 TMEM207Q6UWW9 146 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 LIPIQ6XZB0 460 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 DPPA4Q7L190 304 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 PELI3Q8N2H9 469 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 SPATA6LQ8N4H0 392 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 EID2Q8N6I1 236 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 FBXO27Q8NI29 283 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 FAM174AQ8TBP5 190 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 FUBP1Q96AE4 644 aaKnown RBP16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 SMIM14Q96QK8 99 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 PANX3Q96QZ0 392 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 CCT7Q99832 543 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 VCX3BQ9H321 246 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 ALG9Q9H6U8 611 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 WDR55Q9H6Y2 383 aaPredicted RBP16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 PKP3Q9Y446 797 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 PCDHB1Q9Y5F3 818 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 SPO11Q9Y5K1 396 aa16.91■□□□□ 0.3
RBFOX1-207ENST00000547338 LRP4O75096 1905 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 WDFY3Q8IZQ1 3526 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 LOC100653049A0A140TA62 436 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 OR51F1A6NGY5 319 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 LIN7AO14910 233 aaPredicted RBP16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 NVLO15381 856 aaKnown RBP16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 TNFSF14O43557 240 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 SOCS5O75159 536 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 GPC4O75487 556 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 PIAS2O75928 621 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 KRT34O76011 436 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 ATP6V1C1P21283 382 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 XPAP23025 273 aaPredicted RBP16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 ACADVLP49748 655 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 TIAL1Q01085 375 aaKnown RBP eCLIP16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 TAF11Q15544 211 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 ARMC12Q5T9G4 340 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 NXNQ6DKJ4 435 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 DEFB107AQ8IZN7 70 aa16.9■□□□□ 0.3
RBFOX1-207ENST00000547338 PGAM4Q8N0Y7 254 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms