RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 SPRY4Q9C004 299 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 FGF21Q9NSA1 209 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 ACTR10Q9NZ32 417 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 IL1RAPL1Q9NZN1 696 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 ICKQ9UPZ9 632 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 FAM169AQ9Y6X4 670 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 CFAP47Q6ZTR5 3102 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 SLC9B1P1A6NJY1 282 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 EFSO43281 561 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 NIPSNAP2O75323 286 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 S1PR4O95977 384 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 EBLN1P0CF75 366 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 PKMP14618 531 aaKnown RBP15.24■□□□□ 0.03
CCDC78-216ENST00000544996 TUBB4BP68371 445 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 RHDQ02161 417 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 DHX9Q08211 1270 aaKnown RBP15.24■□□□□ 0.03
CCDC78-216ENST00000544996 CTBP1Q13363 440 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 TUBB2AQ13885 445 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 MAP7Q14244 749 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 CRYMQ14894 314 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 BBS9Q3SYG4 887 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 SYT10Q6XYQ8 523 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 DCUN1D3Q8IWE4 304 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 DENND6AQ8IWF6 608 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 AGGF1Q8N302 714 aaeCLIP15.24■□□□□ 0.03
CCDC78-216ENST00000544996 ESX1Q8N693 406 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 SNF8Q96H20 258 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 EBNA1BP2Q99848 306 aaKnown RBP15.24■□□□□ 0.03
CCDC78-216ENST00000544996 TRIM51Q9BSJ1 452 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 TUBB2BQ9BVA1 445 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 FANCEQ9HB96 536 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 LNPEPQ9UIQ6 1025 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 BTRCQ9Y297 605 aa15.24■□□□□ 0.03
CCDC78-216ENST00000544996 EFCAB8A8MWE9 144 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 SPAG6O75602 509 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 KIAA0754O94854 1291 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 DLGAP3O95886 979 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 CHRM5P08912 532 aaPredicted RBP15.23■□□□□ 0.03
CCDC78-216ENST00000544996 RAB28P51157 221 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 SRSF6Q13247 344 aaKnown RBP15.23■□□□□ 0.03
CCDC78-216ENST00000544996 HIF1AQ16665 826 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 HSP90AA5PQ58FG0 334 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 SPANXN3Q5MJ09 141 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 FBXO38Q6PIJ6 1188 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 SPESP1Q6UW49 350 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 C6orf15Q6UXA7 325 aaPredicted RBP15.23■□□□□ 0.03
CCDC78-216ENST00000544996 MAATS1Q7Z4T9 603 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 KCNMB4Q86W47 210 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 RAB42Q8N4Z0 105 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 ZBTB2Q8N680 514 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 BBOF1Q8ND07 529 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 SPATA4Q8NEY3 305 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 OR8K5Q8NH50 307 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 MAGEC3Q8TD91 643 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 RAD51AP1Q96B01 352 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 FAM136AQ96C01 138 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 PPM1MQ96MI6 270 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 NRTNQ99748 197 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 EFHD1Q9BUP0 239 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 PITPNM3Q9BZ71 974 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 TRIM31Q9BZY9 425 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 GPN2Q9H9Y4 310 aaPredicted RBP15.23■□□□□ 0.03
CCDC78-216ENST00000544996 SYTL2Q9HCH5 934 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 FBXO6Q9NRD1 293 aaPredicted RBP15.23■□□□□ 0.03
CCDC78-216ENST00000544996 SLC39A10Q9ULF5 831 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 PLAGL1Q9UM63 463 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 COMMD10Q9Y6G5 202 aa15.23■□□□□ 0.03
CCDC78-216ENST00000544996 ERVH48-1M5A8F1 160 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 SEC31AO94979 1220 aaKnown RBP15.22■□□□□ 0.03
CCDC78-216ENST00000544996 MT-ND3P03897 115 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 CCNYL3P0C7X3 344 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 TPBGLP0DKB5 382 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 ZNF28P17035 718 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 ATP5DP30049 168 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 CCNFP41002 786 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 SLC1A2P43004 574 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 ITGA8P53708 1063 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 ARL4CP56559 192 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 ABHD18Q0P651 414 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 KIR2DS3Q14952 304 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 GPR19Q15760 415 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 KYNUQ16719 465 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 TTLL9Q3SXZ7 439 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 MSS51Q4VC12 460 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 ZNF789Q5FWF6 425 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 HIBCHQ6NVY1 386 aaPredicted RBP15.22■□□□□ 0.03
CCDC78-216ENST00000544996 TIPARPQ7Z3E1 657 aaKnown RBP15.22■□□□□ 0.03
CCDC78-216ENST00000544996 SLC22A18Q96BI1 424 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 LRRC39Q96DD0 335 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 RAB11FIP5Q9BXF6 653 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 LATS2Q9NRM7 1088 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 IARS2Q9NSE4 1012 aaKnown RBP15.22■□□□□ 0.03
CCDC78-216ENST00000544996 FBXO5Q9UKT4 447 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 PCDHGA4Q9Y5G9 962 aa15.22■□□□□ 0.03
CCDC78-216ENST00000544996 ITPR1Q14643 2758 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 EIF4E1BA6NMX2 242 aaKnown RBP15.21■□□□□ 0.03
CCDC78-216ENST00000544996 ISM1B1AKI9 464 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 BANF1O75531 89 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 ERVK-10P10266 1014 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 LIFP15018 202 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms