RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 PRICKLE1Q96MT3 831 aaPredicted RBP4.45□□□□□ -1.7
C2CD3-218ENST00000542484 BBS4Q96RK4 519 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 KRT12Q99456 494 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 PRMT1Q99873 361 aaKnown RBP4.45□□□□□ -1.7
C2CD3-218ENST00000542484 ECSITQ9BQ95 431 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 MXRA8Q9BRK3 442 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 NUF2Q9BZD4 464 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 DENND2DQ9H6A0 471 aaPredicted RBP4.45□□□□□ -1.7
C2CD3-218ENST00000542484 C10orf88Q9H8K7 445 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 NHEJ1Q9H9Q4 299 aaPredicted RBP4.45□□□□□ -1.7
C2CD3-218ENST00000542484 PALMDQ9NP74 551 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 SAR1AQ9NR31 198 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 PAG1Q9NWQ8 432 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 COMMD8Q9NX08 183 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 UVRAGQ9P2Y5 699 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 PCSK1NQ9UHG2 260 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 RWDD2AQ9UIY3 292 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 FZD10Q9ULW2 581 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 RABGAP1Q9Y3P9 1069 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 TNFRSF18Q9Y5U5 241 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.45□□□□□ -1.7
C2CD3-218ENST00000542484 ARAP3Q8WWN8 1544 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 MAP3K19Q56UN5 1328 aa4.45□□□□□ -1.7
C2CD3-218ENST00000542484 MYH7BA7E2Y1 1941 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 BCL9LQ86UU0 1499 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 XRN1Q8IZH2 1706 aaKnown RBP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 A0A1W2PP64 1363 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 LOC105371267A0A1B0GV96 52 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 PVALEFA0A1B0GWK0 134 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 TTC26A0AVF1 554 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 OR6C75A6NL08 312 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 SYCE1LA8MT33 242 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 TCP11X1B4DZS4 312 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 ERVV-2B6SEH9 535 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 INAFM1C9JVW0 142 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 GOLGA8MH3BSY2 632 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 CAPN9O14815 690 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 MCF2LO15068 1137 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 MAGEB3O15480 346 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 TGFB1I1O43294 461 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 RAD51CO43502 376 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 DKC1O60832 514 aaKnown RBP eCLIP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 TRMUO75648 421 aaKnown RBP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 KRT6AP02538 564 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 KRT6BP04259 564 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 OCM2P0CE71 109 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 OCMP0CE72 109 aaPredicted RBP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 GM2AP17900 193 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 ITGAXP20702 1163 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 AGAP20933 346 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 CDH3P22223 829 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 PRKACBP22694 351 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 PSMA4P25789 261 aaKnown RBP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 CHATP28329 748 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 MARCKSP29966 332 aaPredicted RBP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 GNA11P29992 359 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 ARRB2P32121 409 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 ICAM3P32942 547 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 BSGP35613 385 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 EPS15P42566 896 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 RXRGP48443 463 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 GSSP48637 474 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 KRT6CP48668 564 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 EIF2B2P49770 351 aaKnown RBP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 HSD17B4P51659 736 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 THOP1P52888 689 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 POLGP54098 1239 aaPredicted RBP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 NUP107P57740 925 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 LINC00205P59089 165 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 RPS3AP61247 264 aaKnown RBP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 NAA20P61599 178 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 NOP14P78316 857 aaKnown RBP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 IRX4P78413 519 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 UBXN1Q04323 297 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 HSPA14Q0VDF9 509 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 MED21Q13503 144 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 PPP2R5BQ15173 497 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 TBCEQ15813 527 aaPredicted RBP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 SOWAHAQ2M3V2 549 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 MYLK3Q32MK0 819 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 ZC2HC1CQ53FD0 456 aaPredicted RBP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 TCP11X2Q5H9J9 407 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 FSCBQ5H9T9 825 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 FNBP1LQ5T0N5 605 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 SIGIRRQ6IA17 410 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 LRRC8EQ6NSJ5 796 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 CES5AQ6NT32 575 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 RWDD4Q6NW29 188 aaKnown RBP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 FAM180BQ6P0A1 224 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 CDC73Q6P1J9 531 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 C1orf122Q6ZSJ8 110 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 MIER3Q7Z3K6 550 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 NET1Q7Z628 596 aaPredicted RBP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 ERI1Q8IV48 349 aaKnown RBP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 MB21D2Q8IYB1 491 aaPredicted RBP4.44□□□□□ -1.7
C2CD3-218ENST00000542484 PARP16Q8N5Y8 322 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 OR7G1Q8NGA0 311 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 ETNPPLQ8TBG4 499 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 SCFD1Q8WVM8 642 aa4.44□□□□□ -1.7
C2CD3-218ENST00000542484 CKAP2Q8WWK9 683 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms