RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 PNPT1Q8TCS8 783 aaKnown RBP15.03■□□□□ -0
CNOT9-208ENST00000542068 CD99L2Q8TCZ2 262 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 SLC13A3Q8WWT9 602 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 FUBP3Q96I24 572 aaKnown RBP eCLIP15.03■□□□□ -0
CNOT9-208ENST00000542068 C8orf48Q96LL4 319 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 TUBA1CQ9BQE3 449 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 HMG20AQ9NP66 347 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 ZIM2Q9NZV7 527 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 ORC6Q9Y5N6 252 aa15.03■□□□□ -0
CNOT9-208ENST00000542068 TET1Q8NFU7 2136 aa15.02■□□□□ -0
CNOT9-208ENST00000542068 BCKDKO14874 412 aa15.02■□□□□ -0
CNOT9-208ENST00000542068 SH3BGRLO75368 114 aa15.02■□□□□ -0
CNOT9-208ENST00000542068 C7P10643 843 aa15.02■□□□□ -0
CNOT9-208ENST00000542068 EMX1Q04741 257 aaPredicted RBP15.02■□□□□ -0
CNOT9-208ENST00000542068 CDH18Q13634 790 aa15.02■□□□□ -0
CNOT9-208ENST00000542068 ZNF846Q147U1 533 aa15.02■□□□□ -0
CNOT9-208ENST00000542068 TMEM53Q6P2H8 277 aa15.02■□□□□ -0
CNOT9-208ENST00000542068 EID3Q8N140 333 aa15.02■□□□□ -0
CNOT9-208ENST00000542068 FBXO22Q8NEZ5 403 aa15.02■□□□□ -0
CNOT9-208ENST00000542068 YIPF2Q9BWQ6 316 aa15.02■□□□□ -0
CNOT9-208ENST00000542068 DNAJB9Q9UBS3 223 aa15.02■□□□□ -0
CNOT9-208ENST00000542068 ZNF236Q9UL36 1845 aa15.02■□□□□ -0
CNOT9-208ENST00000542068 ELOVL7A1L3X0 281 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 C2orf78A6NCI8 922 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 UNCXA6NJT0 531 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 INSIG1O15503 277 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 PWP1Q13610 501 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 SYT16Q17RD7 645 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 ADPRMQ3LIE5 342 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 IRAK1BP1Q5VVH5 260 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 NECAB2Q7Z6G3 386 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 NKAPQ8N5F7 415 aaKnown RBP15.02□□□□□ -0.01
CNOT9-208ENST00000542068 NETO1Q8TDF5 533 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 OR52E6Q96RD3 313 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 ZNF347Q96SE7 839 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 TTPALQ9BTX7 342 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 YTHDF1Q9BYJ9 559 aaKnown RBP15.02□□□□□ -0.01
CNOT9-208ENST00000542068 BRINP2Q9C0B6 783 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 OLA1Q9NTK5 396 aaKnown RBP15.02□□□□□ -0.01
CNOT9-208ENST00000542068 ATAD3AQ9NVI7 634 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 ZSWIM8A7E2V4 1837 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 A0A1W2PQ67 120 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 ZNF99A8MXY4 864 aaPredicted RBP15.02□□□□□ -0.01
CNOT9-208ENST00000542068 TBL1XO60907 577 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 MZF1P28698 734 aaPredicted RBP15.02□□□□□ -0.01
CNOT9-208ENST00000542068 TPTEP56180 551 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 CPSF6Q16630 551 aaKnown RBP eCLIP15.02□□□□□ -0.01
CNOT9-208ENST00000542068 CTSL3PQ5NE16 218 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 RBM48Q5RL73 367 aaKnown RBP15.02□□□□□ -0.01
CNOT9-208ENST00000542068 LAIR2Q6ISS4 152 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 LRRC8DQ7L1W4 858 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 GOLM1Q8NBJ4 401 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 HDAC2Q92769 488 aaKnown RBP15.02□□□□□ -0.01
CNOT9-208ENST00000542068 WBP2Q969T9 261 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 MAGED4Q96JG8 741 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 TSSK3Q96PN8 268 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 MUC13Q9H3R2 512 aa15.02□□□□□ -0.01
CNOT9-208ENST00000542068 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.02□□□□□ -0.01
CNOT9-208ENST00000542068 TULP3O75386 442 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 S100BP04271 92 aaPredicted RBP15.01□□□□□ -0.01
CNOT9-208ENST00000542068 PRR35P0CG20 571 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 AKT1P31749 480 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 RCVRNP35243 200 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 HOXD12P35452 270 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 FAM189BP81408 668 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 SP3Q02447 781 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 GTF2H2Q13888 395 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 NPTX1Q15818 432 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 COQ5Q5HYK3 327 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 HECTD3Q5T447 861 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 GTF2H2CQ6P1K8 395 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 SLC22A16Q86VW1 577 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 ARL10Q8N8L6 244 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 LEMD2Q8NC56 503 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 CD200R1Q8TD46 325 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 FKBP10Q96AY3 582 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 FAM120BQ96EK7 910 aaKnown RBP15.01□□□□□ -0.01
CNOT9-208ENST00000542068 OSBPL10Q9BXB5 764 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 TNKS2Q9H2K2 1166 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 ZNF639Q9UID6 485 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 PKP3Q9Y446 797 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 EOMESO95936 686 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 GSTT2P0CG29 244 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 GSTT2BP0CG30 244 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 ATF6P18850 670 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 OGNP20774 298 aaKnown RBP15.01□□□□□ -0.01
CNOT9-208ENST00000542068 LPOP22079 712 aaPredicted RBP15.01□□□□□ -0.01
CNOT9-208ENST00000542068 EPHA2P29317 976 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 DCTP40126 519 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 SMAD3P84022 425 aaKnown RBP15.01□□□□□ -0.01
CNOT9-208ENST00000542068 TSTA3Q13630 321 aaPredicted RBP15.01□□□□□ -0.01
CNOT9-208ENST00000542068 AFTPHQ6ULP2 937 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 ZNF540Q8NDQ6 660 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 ULK4Q96C45 1275 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 NUSAP1Q9BXS6 441 aaKnown RBP15.01□□□□□ -0.01
CNOT9-208ENST00000542068 GPN2Q9H9Y4 310 aaPredicted RBP15.01□□□□□ -0.01
CNOT9-208ENST00000542068 VNN3Q9NY84 501 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 TRPM5Q9NZQ8 1165 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 TANC1Q9C0D5 1861 aa15.01□□□□□ -0.01
CNOT9-208ENST00000542068 FAM92AA1XBS5 289 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms