RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 CLDN5O00501 218 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 TNFRSF10BO14763 440 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 MAGEB3O15480 346 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 SNX2O60749 519 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 BEST1O76090 585 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 RECQL5O94762 991 aaPredicted RBP10.21□□□□□ -0.77
CHFR-219ENST00000541341 SEC24DO94855 1032 aaPredicted RBP10.21□□□□□ -0.77
CHFR-219ENST00000541341 APOA1P02647 267 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 CYBBP04839 570 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 UROSP10746 265 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 ATF6P18850 670 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 BDNFP23560 247 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 CRHBPP24387 322 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 CD68P34810 354 aaPredicted RBP10.21□□□□□ -0.77
CHFR-219ENST00000541341 GSSP48637 474 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 PRIM2P49643 509 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 GPR15P49685 360 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 GSK3BP49841 420 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 SERPINH1P50454 418 aaKnown RBP10.21□□□□□ -0.77
CHFR-219ENST00000541341 PPP5CP53041 499 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 CDH15P55291 814 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 ERVK-8P63133 956 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 ZNF45Q02386 682 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 LIPEQ05469 1076 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 ADIGQ0VDE8 80 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 RALGDSQ12967 914 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 BNIP3Q12983 259 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 LRRC32Q14392 662 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 NEDD8Q15843 81 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 C6orf141Q5SZD1 244 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 TSTD2Q5T7W7 516 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 SDHAF4Q5VUM1 108 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 GTF2IRD2BQ6EKJ0 949 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 THOC7Q6I9Y2 204 aaKnown RBP10.21□□□□□ -0.77
CHFR-219ENST00000541341 RANBP10Q6VN20 620 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 PLEKHG7Q6ZR37 379 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 GTF2IRD2Q86UP8 949 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 LGI2Q8N0V4 545 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 SPEM1Q8N4L4 309 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 NKAPQ8N5F7 415 aaKnown RBP10.21□□□□□ -0.77
CHFR-219ENST00000541341 SLC15A4Q8N697 577 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 CELF5Q8N6W0 485 aaKnown RBP10.21□□□□□ -0.77
CHFR-219ENST00000541341 GLB1L3Q8NCI6 653 aaPredicted RBP10.21□□□□□ -0.77
CHFR-219ENST00000541341 FAM156AQ8NDB6 213 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 TWIST2Q8WVJ9 160 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 MUL1Q969V5 352 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 TMEM125Q96AQ2 219 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 PPP1R36Q96LQ0 422 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 CTRCQ99895 268 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 APOL4Q9BPW4 351 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 MED10Q9BTT4 135 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 CHID1Q9BWS9 393 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 FAM126AQ9BYI3 521 aaPredicted RBP10.21□□□□□ -0.77
CHFR-219ENST00000541341 SLC25A51Q9H1U9 297 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 ARRDC1-AS1Q9H2J1 176 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 ADNPQ9H2P0 1102 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 MMP27Q9H306 513 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 AKTIPQ9H8T0 292 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 NANOGQ9H9S0 305 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 LIN28AQ9H9Z2 209 aaKnown RBP10.21□□□□□ -0.77
CHFR-219ENST00000541341 ABI2Q9NYB9 513 aaPredicted RBP10.21□□□□□ -0.77
CHFR-219ENST00000541341 IL37Q9NZH6 218 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 SLC17A6Q9P2U8 582 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 OR12D3Q9UGF7 316 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 NAALAD2Q9Y3Q0 740 aa10.21□□□□□ -0.77
CHFR-219ENST00000541341 TCRBV5S2A0A599 114 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 EVPLLA8MZ36 301 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 DLGAP1O14490 977 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 GNGT2O14610 69 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 GSTA4O15217 222 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 SLC16A6O15403 523 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 AQP9O43315 295 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 NDUFS2O75306 463 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 GABARAPO95166 117 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 PTTG1O95997 202 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 EPOP01588 193 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 FUCA1P04066 466 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 RETP07949 1114 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 ADRB1P08588 477 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 HNRNPLP14866 589 aaKnown RBP eCLIP10.2□□□□□ -0.78
CHFR-219ENST00000541341 ZNF182P17025 639 aaPredicted RBP10.2□□□□□ -0.78
CHFR-219ENST00000541341 SDHBP21912 280 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 ADRA1AP35348 466 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 SLC1A2P43004 574 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 MAP1BP46821 2468 aaKnown RBP10.2□□□□□ -0.78
CHFR-219ENST00000541341 KRT6CP48668 564 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 SUOXP51687 545 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 POLR2JP52435 117 aaKnown RBP10.2□□□□□ -0.78
CHFR-219ENST00000541341 DAOAP59103 153 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 BNC1Q01954 994 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 FCHO2Q0JRZ9 810 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 FADDQ13158 208 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 NME3Q13232 169 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 SELPLGQ14242 412 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 TAF12Q16514 161 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 HECTD2Q5U5R9 776 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 UGT3A1Q6NUS8 523 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 METTL2BQ6P1Q9 378 aaKnown RBP10.2□□□□□ -0.78
CHFR-219ENST00000541341 RNF165Q6ZSG1 346 aa10.2□□□□□ -0.78
CHFR-219ENST00000541341 IGFN1Q86VF2 1251 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms