RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 ASB8Q9H765 288 aa12.27□□□□□ -0.45
RNF4-222ENST00000541204 HCFC1R1Q9NWW0 138 aa12.27□□□□□ -0.45
RNF4-222ENST00000541204 VAPAQ9P0L0 249 aa12.27□□□□□ -0.45
RNF4-222ENST00000541204 LSM7Q9UK45 103 aaKnown RBP12.27□□□□□ -0.45
RNF4-222ENST00000541204 NEUROG3Q9Y4Z2 214 aa12.27□□□□□ -0.45
RNF4-222ENST00000541204 PCDHGA8Q9Y5G5 932 aa12.27□□□□□ -0.45
RNF4-222ENST00000541204 K7EPI3 171 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 LSM1O15116 133 aaKnown RBP12.26□□□□□ -0.45
RNF4-222ENST00000541204 PFDN6O15212 129 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 CCL16O15467 120 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 DFNA5O60443 496 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 FGF18O76093 207 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 PARNO95453 639 aaKnown RBP12.26□□□□□ -0.45
RNF4-222ENST00000541204 LRG1P02750 347 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 JUNBP17275 347 aaPredicted RBP12.26□□□□□ -0.45
RNF4-222ENST00000541204 NR4A1P22736 598 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 MLLT10P55197 1068 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 NKG7Q16617 165 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 MEP1AQ16819 746 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 RETSATQ6NUM9 610 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 Q6ZNB5 142 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 TSPAN33Q86UF1 283 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 SERPINA9Q86WD7 417 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 C8orf59Q8N0T1 100 aaPredicted RBP12.26□□□□□ -0.45
RNF4-222ENST00000541204 CENPSQ8N2Z9 138 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 DCAF4L2Q8NA75 395 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 OR4F6Q8NGB9 312 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 CIPCQ9C0C6 399 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 RETREG1Q9H6L5 497 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 ZFYVE1Q9HBF4 777 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 HEBP1Q9NRV9 189 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 STOML2Q9UJZ1 356 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 CCL26Q9Y258 94 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 KIAA0100Q14667 2235 aaKnown RBP12.26□□□□□ -0.45
RNF4-222ENST00000541204 FZD6O60353 706 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 ZNF12P17014 697 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 TPP2P29144 1249 aaPredicted RBP12.26□□□□□ -0.45
RNF4-222ENST00000541204 HNF1BP35680 557 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 PIGAP37287 484 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 PPP3CCP48454 512 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 CD97P48960 835 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 PLA2G16P53816 162 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 TPD52P55327 224 aaPredicted RBP12.26□□□□□ -0.45
RNF4-222ENST00000541204 PWP1Q13610 501 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 NR1D2Q14995 579 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 ABRAXAS2Q15018 415 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 AP5B1Q2VPB7 878 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 SLC44A4Q53GD3 710 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 DGKKQ5KSL6 1271 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 SULT1C3Q6IMI6 304 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 FRA10AC1Q70Z53 315 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 SPARTQ8N0X7 666 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 TOX2Q96NM4 488 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 APOL5Q9BWW9 433 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 ABCB8Q9NUT2 735 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 FAM118AQ9NWS6 357 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 ZMYM5Q9UJ78 669 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 COQ6Q9Y2Z9 468 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 PRSS21Q9Y6M0 314 aa12.26□□□□□ -0.45
RNF4-222ENST00000541204 COL4A6Q14031 1691 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 TRIM43BA6NCK2 446 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 OR7A17O14581 309 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 ANKRD28O15084 1053 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 GMNNO75496 209 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 CST1P01037 141 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 C8AP07357 584 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 HMGCLP35914 325 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 PTGER3P43115 390 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 CACNG1Q06432 222 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 LRRC26Q2I0M4 334 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 LDLRAP1Q5SW96 308 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 GOLGA7Q7Z5G4 137 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 ZSWIM9Q86XI8 627 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 OR2T12Q8NG77 320 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 OR10A6Q8NH74 314 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 LKAAEAR1Q8TD35 194 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 RAB2BQ8WUD1 216 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 TRIM43Q96BQ3 446 aaPredicted RBP12.25□□□□□ -0.45
RNF4-222ENST00000541204 SDCCAG3Q96C92 435 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 NRBF2Q96F24 287 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 PAWRQ96IZ0 340 aaKnown RBP12.25□□□□□ -0.45
RNF4-222ENST00000541204 BEGAINQ9BUH8 593 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 DGCR6LQ9BY27 220 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 AMBRA1Q9C0C7 1298 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 HPS4Q9NQG7 708 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 WARS2Q9UGM6 360 aaKnown RBP12.25□□□□□ -0.45
RNF4-222ENST00000541204 LIMD1Q9UGP4 676 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 INTS6Q9UL03 887 aaKnown RBP12.25□□□□□ -0.45
RNF4-222ENST00000541204 PSME2Q9UL46 239 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 VPS9D1Q9Y2B5 631 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 RANBP2P49792 3224 aaKnown RBP12.25□□□□□ -0.45
RNF4-222ENST00000541204 ABHD14A-ACY1A0A1B0GW23 586 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 FUOMA2VDF0 154 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 ARNTLO00327 626 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 GSTA4O15217 222 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 FUCA1P04066 466 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 HTR1AP08908 422 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 CBX3Q13185 183 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 PTGR1Q14914 329 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 RBM48Q5RL73 367 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms