RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 STK17BO94768 372 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 AP2A2O94973 939 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 SLU7O95391 586 aaKnown RBP13.84□□□□□ -0.19
LTBR-209ENST00000541102 TTC4O95801 387 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 C1QAP02745 245 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 ITGB6P18564 788 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 PAMP19021 973 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 ARL4DP49703 201 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 CYP4F2P78329 520 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 COL9A2Q14055 689 aaPredicted RBP13.84□□□□□ -0.19
LTBR-209ENST00000541102 ITIH4Q14624 930 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 CTSL3PQ5NE16 218 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 TIPARPQ7Z3E1 657 aaKnown RBP13.84□□□□□ -0.19
LTBR-209ENST00000541102 PRSS42Q7Z5A4 293 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 KRT222Q8N1A0 295 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 LSM14AQ8ND56 463 aaKnown RBP13.84□□□□□ -0.19
LTBR-209ENST00000541102 ZFPM2Q8WW38 1151 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 KLHL6Q8WZ60 621 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 ELMO1Q92556 727 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 LPGAT1Q92604 370 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 CERS2Q96G23 380 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 BIRC8Q96P09 236 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 TTC1Q99614 292 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 MAP3K3Q99759 626 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 NAT9Q9BTE0 207 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 RAB33BQ9H082 229 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 P2RY12Q9H244 342 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 OR52A5Q9H2C5 316 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 KIR3DX1Q9H7L2 352 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 LRRC4CQ9HCJ2 640 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 MOCS1Q9NZB8 636 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 GALPQ9UBC7 116 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 PILRAQ9UKJ1 303 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 FBXO5Q9UKT4 447 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 CRYL1Q9Y2S2 319 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 PCDHGA4Q9Y5G9 962 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 HEBP2Q9Y5Z4 205 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 PSAT1Q9Y617 370 aa13.84□□□□□ -0.19
LTBR-209ENST00000541102 IGHV5-51A0A0C4DH38 117 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 UBA6A0AVT1 1052 aaPredicted RBP13.83□□□□□ -0.2
LTBR-209ENST00000541102 CXorf49A8MYA2 514 aaPredicted RBP13.83□□□□□ -0.2
LTBR-209ENST00000541102 TK2O00142 265 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 HAUS5O94927 633 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 LIFP15018 202 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 NELFEP18615 380 aaKnown RBP13.83□□□□□ -0.2
LTBR-209ENST00000541102 POLR2CP19387 275 aaPredicted RBP13.83□□□□□ -0.2
LTBR-209ENST00000541102 NDUFS1P28331 727 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 FMO4P31512 558 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 TTPAP49638 278 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 CUL1Q13616 776 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 THOC5Q13769 683 aaKnown RBP13.83□□□□□ -0.2
LTBR-209ENST00000541102 LY6DQ14210 128 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 KCNAB1Q14722 419 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 TEDDM1Q5T9Z0 273 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 LYPLAL1Q5VWZ2 237 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 MRNIPQ6NTE8 343 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 ZNF549Q6P9A3 640 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 FBXO38Q6PIJ6 1188 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 CNSTQ6PJW8 725 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 CERS6Q6ZMG9 384 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 OOSP2Q86WS3 158 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 RASGRP3Q8IV61 690 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 IFT20Q8IY31 132 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 NLGN4XQ8N0W4 816 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 SIDT2Q8NBJ9 832 aaKnown RBP13.83□□□□□ -0.2
LTBR-209ENST00000541102 NLGN4YQ8NFZ3 816 aaPredicted RBP13.83□□□□□ -0.2
LTBR-209ENST00000541102 LCN9Q8WX39 176 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 UBXN4Q92575 508 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 TTC9Q92623 222 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 FMO2Q99518 471 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 SPRY4Q9C004 299 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 NINJ2Q9NZG7 142 aa13.83□□□□□ -0.2
LTBR-209ENST00000541102 FASNP49327 2511 aaKnown RBP13.82□□□□□ -0.2
LTBR-209ENST00000541102 NDUFS3O75489 264 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 AHSGP02765 367 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 FTH1P02794 183 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 OR56A5P0C7T3 313 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 ZNF28P17035 718 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 OGNP20774 298 aaKnown RBP13.82□□□□□ -0.2
LTBR-209ENST00000541102 MAP4P27816 1152 aaKnown RBP13.82□□□□□ -0.2
LTBR-209ENST00000541102 CD151P48509 253 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 PGGT1BP53609 377 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 CSE1LP55060 971 aaKnown RBP13.82□□□□□ -0.2
LTBR-209ENST00000541102 EIF3BP55884 814 aaKnown RBP13.82□□□□□ -0.2
LTBR-209ENST00000541102 PRKAA1Q13131 559 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 RPA4Q13156 261 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 PRKG2Q13237 762 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 BOP1Q14137 746 aaKnown RBP13.82□□□□□ -0.2
LTBR-209ENST00000541102 FRG1Q14331 258 aaKnown RBP13.82□□□□□ -0.2
LTBR-209ENST00000541102 EFTUD2Q15029 972 aaKnown RBP eCLIP13.82□□□□□ -0.23e-9■■■■■ 48.7
LTBR-209ENST00000541102 KYNUQ16719 465 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 SYTL3Q4VX76 610 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 C3orf62Q6ZUJ4 267 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 CNTN4Q8IWV2 1026 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 PALM2Q8IXS6 379 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 C2CD4AQ8NCU7 369 aaPredicted RBP13.82□□□□□ -0.2
LTBR-209ENST00000541102 ACVR1CQ8NER5 493 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 GSDMBQ8TAX9 411 aa13.82□□□□□ -0.2
LTBR-209ENST00000541102 TFGQ92734 400 aaPredicted RBP13.82□□□□□ -0.2
LTBR-209ENST00000541102 EXTL1Q92935 676 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms