RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 VARSP26640 1264 aaKnown RBP10.07□□□□□ -0.8
CDCA3-208ENST00000540683 CSRP3P50461 194 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 RAB28P51157 221 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 CYP4F2P78329 520 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 UGT8Q16880 541 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 DEFB109BQ30KR1 87 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 CCDC38Q502W7 563 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 FAM182AQ5T1J6 154 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 YOD1Q5VVQ6 348 aaPredicted RBP10.07□□□□□ -0.8
CDCA3-208ENST00000540683 LRRC8BQ6P9F7 803 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 OTOAQ7RTW8 1153 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 APLFQ8IW19 511 aaPredicted RBP10.07□□□□□ -0.8
CDCA3-208ENST00000540683 DCUN1D3Q8IWE4 304 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 LMNTD2Q8IXW0 634 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 PIANPQ8IYJ0 282 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 SLC22A15Q8IZD6 547 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 UNC5BQ8IZJ1 945 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 OR13J1Q8NGT2 312 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 MR1Q95460 341 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 RAD51AP1Q96B01 352 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 ZNF501Q96CX3 271 aaPredicted RBP10.07□□□□□ -0.8
CDCA3-208ENST00000540683 NLNQ9BYT8 704 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 CLMPQ9H6B4 373 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 ACTR5Q9H9F9 607 aaPredicted RBP10.07□□□□□ -0.8
CDCA3-208ENST00000540683 XAB2Q9HCS7 855 aaKnown RBP10.07□□□□□ -0.8
CDCA3-208ENST00000540683 UTP6Q9NYH9 597 aaKnown RBP10.07□□□□□ -0.8
CDCA3-208ENST00000540683 ACTR10Q9NZ32 417 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 GPN3Q9UHW5 284 aaPredicted RBP10.07□□□□□ -0.8
CDCA3-208ENST00000540683 SLC39A10Q9ULF5 831 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 FARSAQ9Y285 508 aaKnown RBP10.07□□□□□ -0.8
CDCA3-208ENST00000540683 PPP2R2CQ9Y2T4 447 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 PCDHGB7Q9Y5F8 929 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 TLN1Q9Y490 2541 aaKnown RBP10.07□□□□□ -0.8
CDCA3-208ENST00000540683 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.06□□□□□ -0.8
CDCA3-208ENST00000540683 A0A0J9YY10 115 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 SLC5A10A0PJK1 596 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 SLC9B1P1A6NJY1 282 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 TMEM150CB9EJG8 249 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 MEN1O00255 615 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 BTN3A1O00481 513 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 CCL22O00626 93 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 SUV39H1O43463 412 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 WISP1O95388 367 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 S1PR4O95977 384 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 ESR1P03372 595 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 NTRK1P04629 796 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 MLNP12872 115 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 WT1P19544 449 aaPredicted RBP10.06□□□□□ -0.8
CDCA3-208ENST00000540683 RPS3P23396 243 aaKnown RBP eCLIP10.06□□□□□ -0.83e-9■■■■■ 36.7
CDCA3-208ENST00000540683 ACADLP28330 430 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 PDHA2P29803 388 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 RPL22P35268 128 aaKnown RBP10.06□□□□□ -0.8
CDCA3-208ENST00000540683 HSD17B2P37059 387 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 CDKN1CP49918 316 aaPredicted RBP10.06□□□□□ -0.8
CDCA3-208ENST00000540683 PMS2P54278 862 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 ARSFP54793 590 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 ADARP55265 1226 aaKnown RBP10.06□□□□□ -0.8
CDCA3-208ENST00000540683 SESN2P58004 480 aaPredicted RBP10.06□□□□□ -0.8
CDCA3-208ENST00000540683 HSPA14Q0VDF9 509 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 KLRB1Q12918 225 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 PRKG2Q13237 762 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 SRSF6Q13247 344 aaKnown RBP10.06□□□□□ -0.8
CDCA3-208ENST00000540683 ERV3-1Q14264 604 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 SLC5A12Q1EHB4 618 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 TTLL9Q3SXZ7 439 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 ZNF658BQ4V348 819 aaPredicted RBP10.06□□□□□ -0.8
CDCA3-208ENST00000540683 ZC3H12BQ5HYM0 836 aaKnown RBP10.06□□□□□ -0.8
CDCA3-208ENST00000540683 PLEKHS1Q5SXH7 462 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 TCTN3Q6NUS6 607 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 DUS1LQ6P1R4 473 aaKnown RBP10.06□□□□□ -0.8
CDCA3-208ENST00000540683 RAB43Q86YS6 212 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 TAB3Q8N5C8 712 aaPredicted RBP10.06□□□□□ -0.8
CDCA3-208ENST00000540683 C19orf47Q8N9M1 422 aaKnown RBP10.06□□□□□ -0.8
CDCA3-208ENST00000540683 CALML6Q8TD86 181 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 CT55Q8WUE5 264 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 NACC2Q96BF6 587 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 TRAPPC9Q96Q05 1148 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 AP1M1Q9BXS5 423 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 CCDC68Q9H2F9 335 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 ACTL8Q9H568 366 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 TXLNGQ9NUQ3 528 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 IRAK4Q9NWZ3 460 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 IL1RAPL1Q9NZN1 696 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 IL17BQ9UHF5 180 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 TTC7AQ9ULT0 858 aaPredicted RBP10.06□□□□□ -0.8
CDCA3-208ENST00000540683 SNX7Q9UNH6 387 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 TDRKHQ9Y2W6 561 aaKnown RBP10.06□□□□□ -0.8
CDCA3-208ENST00000540683 KCNMB2Q9Y691 235 aa10.06□□□□□ -0.8
CDCA3-208ENST00000540683 BOD1L1Q8NFC6 3051 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 CDC14CA4D256 554 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 ISM1B1AKI9 464 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 E5RI56 91 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 CES2O00748 559 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 NDC80O14777 642 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 KIF5CO60282 957 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 PHF2O75151 1096 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 OR2B3O76000 313 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 SLCO2B1O94956 709 aa10.05□□□□□ -0.8
CDCA3-208ENST00000540683 CHRM5P08912 532 aaPredicted RBP10.05□□□□□ -0.8
CDCA3-208ENST00000540683 ZNF28P17035 718 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms