RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 PYCR3Q53H96 274 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 ARMC12Q5T9G4 340 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 ANKRD54Q6NXT1 300 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 SYCE2Q6PIF2 218 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 TBPL2Q6SJ96 375 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 LINGO4Q6UY18 593 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 LYSMD3Q7Z3D4 306 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 SERPINA9Q86WD7 417 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 OFCC1Q8IZS5 231 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 RBFAQ8N0V3 343 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 C12orf76Q8N812 135 aaPredicted RBP14.25□□□□□ -0.13
CDCA3-207ENST00000538862 GLB1L3Q8NCI6 653 aaPredicted RBP14.25□□□□□ -0.13
CDCA3-207ENST00000538862 SMRP1Q8NCR6 262 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 EID2BQ96D98 161 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 ZNF583Q96ND8 569 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 RDH12Q96NR8 316 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 ZBTB18Q99592 522 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 OSBPL6Q9BZF3 934 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 SMPD4Q9NXE4 827 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 AP3M1Q9Y2T2 418 aa14.25□□□□□ -0.13
CDCA3-207ENST00000538862 TEX28O15482 410 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 ADAM12O43184 909 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 KATNA1O75449 491 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 HPRP00739 348 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 DGKQP52824 942 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 AP1S1P61966 158 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 SMAD4Q13485 552 aaKnown RBP14.24□□□□□ -0.13
CDCA3-207ENST00000538862 RAB39AQ14964 217 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 KCTD8Q6ZWB6 473 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 SNX20Q7Z614 316 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 SDR16C5Q8N3Y7 309 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 OR52E4Q8NGH9 312 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 SLC13A3Q8WWT9 602 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 FEM1AQ9BSK4 669 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 RNF38Q9H0F5 515 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 POLR1BQ9H9Y6 1135 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 PLGRKTQ9HBL7 147 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 ZNHIT2Q9UHR6 403 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 NEUROG3Q9Y4Z2 214 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 BACE2Q9Y5Z0 518 aa14.24□□□□□ -0.13
CDCA3-207ENST00000538862 A0A0J9YVX5 310 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 TRIM64BA6NI03 449 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 H0Y626 953 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 H0Y858 1186 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 RSL1D1O76021 490 aaKnown RBP14.23□□□□□ -0.13
CDCA3-207ENST00000538862 PGLSO95336 258 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 PRAMEF12O95522 483 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 LATS1O95835 1130 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 ALPLP05186 524 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 SLC2A4P14672 509 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 AKT1P31749 480 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 HSPA7P48741 367 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 CTBSQ01459 385 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 GRSF1Q12849 480 aaKnown RBP eCLIP14.23□□□□□ -0.13
CDCA3-207ENST00000538862 CBX2Q14781 532 aaPredicted RBP14.23□□□□□ -0.13
CDCA3-207ENST00000538862 LYPLAL1Q5VWZ2 237 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 SULT1C3Q6IMI6 304 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 TMEM184AQ6ZMB5 413 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 SLC22A17Q8WUG5 538 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 PIH1D2Q8WWB5 315 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 TMBIM1Q969X1 311 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 AURKBQ96GD4 344 aaPredicted RBP14.23□□□□□ -0.13
CDCA3-207ENST00000538862 SH3GL1Q99961 368 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 EMILIN2Q9BXX0 1053 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 CD244Q9BZW8 370 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 PREBQ9HCU5 417 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 ELOVL2Q9NXB9 296 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 GALNT8Q9NY28 637 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 ASIC5Q9NY37 505 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 TMEM9Q9P0T7 183 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 IFT80Q9P2H3 777 aaPredicted RBP14.23□□□□□ -0.13
CDCA3-207ENST00000538862 AFF4Q9UHB7 1163 aaKnown RBP14.23□□□□□ -0.13
CDCA3-207ENST00000538862 CDC14AQ9UNH5 594 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 V9GYQ6 96 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 A0A0U1RQS6 177 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 GPR39O43194 453 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 CPNE6O95741 557 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 MT-ND1P03886 318 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 IL6P05231 212 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 IRF1P10914 325 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 MZF1P28698 734 aaPredicted RBP14.23□□□□□ -0.13
CDCA3-207ENST00000538862 OR1D2P34982 312 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 EPS8Q12929 822 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 SMAD2Q15796 467 aaKnown RBP14.23□□□□□ -0.13
CDCA3-207ENST00000538862 PUS10Q3MIT2 529 aaKnown RBP14.23□□□□□ -0.13
CDCA3-207ENST00000538862 OTUD3Q5T2D3 398 aaPredicted RBP14.23□□□□□ -0.13
CDCA3-207ENST00000538862 TMEM214Q6NUQ4 689 aaKnown RBP14.23□□□□□ -0.13
CDCA3-207ENST00000538862 TRIM46Q7Z4K8 759 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 OR2T12Q8NG77 320 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 UBTD2Q8WUN7 234 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 GTF2H4Q92759 462 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 WBP2Q969T9 261 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 MYO19Q96H55 970 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 HBEGFQ99075 208 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 NTMT1Q9BV86 223 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 ZFYVE1Q9HBF4 777 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 VAPAQ9P0L0 249 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 DNMT3BQ9UBC3 853 aaKnown RBP14.23□□□□□ -0.13
CDCA3-207ENST00000538862 OPTCQ9UBM4 332 aa14.23□□□□□ -0.13
CDCA3-207ENST00000538862 DNAJB9Q9UBS3 223 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms