RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 SLC30A8Q8IWU4 369 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 OR10A6Q8NH74 314 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 SETD6Q8TBK2 473 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 ZNF384Q8TF68 577 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 NKD1Q969G9 470 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 SCGB3A2Q96PL1 93 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 RRAGCQ9HB90 399 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 PTTG2Q9NZH5 202 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 ZNF282Q9UDV7 671 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-209ENST00000537178 FBXW2Q9UKT8 454 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 LRRC72A6NJI9 287 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 TSPAN4O14817 238 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 PI15O43692 258 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 PRKD3O94806 890 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 STBD1O95210 358 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 GNAZP19086 355 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 CCKBRP32239 447 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 CLEC6AQ6EIG7 209 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 CHRDL2Q6WN34 429 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 AMIGO1Q86WK6 493 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 INO80EQ8NBZ0 244 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-209ENST00000537178 NETO2Q8NC67 525 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 C9orf43Q8TAL5 461 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-209ENST00000537178 GPR152Q8TDT2 470 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 POLR2J2Q9GZM3 115 aaKnown RBP10.47□□□□□ -0.73
CLIP1-209ENST00000537178 POLR2J3Q9H1A7 115 aaKnown RBP10.47□□□□□ -0.73
CLIP1-209ENST00000537178 C11orf16Q9NQ32 467 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 TVP23BQ9NYZ1 205 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 DNAJB9Q9UBS3 223 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 PCDHGC3Q9UN70 934 aa10.47□□□□□ -0.73
CLIP1-209ENST00000537178 RBM47A0AV96 593 aaKnown RBP10.46□□□□□ -0.73
CLIP1-209ENST00000537178 CYP17A1P05093 508 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 DDX6P26196 483 aaKnown RBP eCLIP10.46□□□□□ -0.73
CLIP1-209ENST00000537178 SP3Q02447 781 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 GNA12Q03113 381 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 ALG10Q5BKT4 473 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 PRAMEF17Q5VTA0 474 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 CHST9Q7L1S5 443 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 SLC13A3Q8WWT9 602 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 CPT1BQ92523 772 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 GATA5Q9BWX5 397 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-209ENST00000537178 B3GNT5Q9BYG0 378 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 FAM124BQ9H5Z6 455 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-209ENST00000537178 MKKSQ9NPJ1 570 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-209ENST00000537178 DNAAF2Q9NVR5 837 aaKnown RBP10.46□□□□□ -0.73
CLIP1-209ENST00000537178 CFL2Q9Y281 166 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 SMIM35A0A1B0GVV1 85 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 E9PAM4 449 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 PLOD2O00469 737 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 OR4F21O95013 312 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 RASGRP1O95267 797 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 IFNA21P01568 189 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 L1CAMP32004 1257 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 PTGER3P43115 390 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 PSMD8P48556 350 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 GBX2P52951 348 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-209ENST00000537178 RPS14P62263 151 aaKnown RBP10.46□□□□□ -0.73
CLIP1-209ENST00000537178 MADCAM1Q13477 382 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 QPCTQ16769 361 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 TBC1D25Q3MII6 688 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 SMARCD3Q6STE5 483 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 LIX1Q8N485 282 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 ANKFN1Q8N957 763 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 SPERTQ8NA61 448 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 OR14C36Q8NHC7 312 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 EMID1Q96A84 441 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-209ENST00000537178 CPXM1Q96SM3 734 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 SLC39A3Q9BRY0 314 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 HTATIP2Q9BUP3 242 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 TMEM109Q9BVC6 243 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 THUMPD1Q9NXG2 353 aaKnown RBP10.46□□□□□ -0.73
CLIP1-209ENST00000537178 MOCS1Q9NZB8 636 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 CNTN6Q9UQ52 1028 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 DOT1LQ8TEK3 1739 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 COL1A2P08123 1366 aa10.46□□□□□ -0.73
CLIP1-209ENST00000537178 DUXAA6NLW8 204 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 OR2AG2A6NM03 316 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 hCG_2039718K7EN88 272 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 TGFB1I1O43294 461 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 NPHS1O60500 1241 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 ITGA10O75578 1167 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 PGLSO95336 258 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 TACSTD2P09758 323 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 RAP2AP10114 183 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 ATP5A1P25705 553 aaKnown RBP10.46□□□□□ -0.74
CLIP1-209ENST00000537178 ACSL1P33121 698 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 RORCP51449 518 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 CRISP3P54108 245 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 SP140Q13342 867 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 PUS10Q3MIT2 529 aaKnown RBP10.46□□□□□ -0.74
CLIP1-209ENST00000537178 XKR4Q5GH76 650 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 PRAMEF19Q5SWL8 479 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 IDNKQ5T6J7 187 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 SYVN1Q86TM6 617 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 CAND1Q86VP6 1230 aaKnown RBP10.46□□□□□ -0.74
CLIP1-209ENST00000537178 XYLT1Q86Y38 959 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 DQX1Q8TE96 717 aaKnown RBP10.46□□□□□ -0.74
CLIP1-209ENST00000537178 SMG7Q92540 1137 aaKnown RBP10.46□□□□□ -0.74
CLIP1-209ENST00000537178 SNTG1Q9NSN8 517 aa10.46□□□□□ -0.74
CLIP1-209ENST00000537178 TMLHEQ9NVH6 421 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms