RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 USP12O75317 370 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 CCNKO75909 580 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 RHOBTB1O94844 696 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 WISP3O95389 354 aaPredicted RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 DLGAP3O95886 979 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 S1PR4O95977 384 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 SERPINF2P08697 491 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 ALDOCP09972 364 aaKnown RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 ODC1P11926 461 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 ANXA8P13928 327 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 TPH1P17752 444 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 CAPN3P20807 821 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 PCMT1P22061 227 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 PSMA3P25788 255 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 ACVR2AP27037 513 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 ERP29P30040 261 aaKnown RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 RRM2P31350 389 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 PTGER3P43115 390 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 CTSKP43235 329 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 NRIP1P48552 1158 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 PXNP49023 591 aaPredicted RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 MAPKAPK2P49137 400 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 CLCN3P51790 818 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 STC1P52823 247 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 TPTEP56180 551 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 ITGA1P56199 1179 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 SLC35A2P78381 396 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 MRPS15P82914 257 aaKnown RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 TSPY1Q01534 308 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 EMX1Q04741 257 aaPredicted RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 CHRNEQ04844 493 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 SRSF11Q05519 484 aaKnown RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 SCN1BQ07699 218 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 IL10RBQ08334 325 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 SIGLEC14Q08ET2 396 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 VEZF1Q14119 521 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 CLCA4Q14CN2 919 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 PCBP2Q15366 365 aaKnown RBP eCLIP5.71□□□□□ -1.5
CHD4-206ENST00000536999 PFKFB4Q16877 469 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 LY6KQ17RY6 165 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 TRIM71Q2Q1W2 868 aaKnown RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 ANKDD1AQ495B1 522 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 ZFP69Q49AA0 526 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 VARS2Q5ST30 1063 aaKnown RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 C10orf62Q5T681 223 aaPredicted RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 AGAP6Q5VW22 663 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 RSBN1Q5VWQ0 802 aaPredicted RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 KIAA1614Q5VZ46 1190 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 AFMIDQ63HM1 303 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 DENND5AQ6IQ26 1287 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 MSANTD2Q6P1R3 559 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 TMC5Q6UXY8 1006 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 ATG14Q6ZNE5 492 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 ZNF767PQ75MW2 155 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 GET4Q7L5D6 327 aaPredicted RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 PAGE2Q7Z2X7 111 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 PIWIL3Q7Z3Z3 882 aaKnown RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 DEFB128Q7Z7B8 93 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 SERPINA11Q86U17 422 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 RETREG3Q86VR2 466 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 SLC22A16Q86VW1 577 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 RAB43Q86YS6 212 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 DENND6AQ8IWF6 608 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 SLC30A8Q8IWU4 369 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 PYROXD2Q8N2H3 581 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 STX19Q8N4C7 294 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 EFHBQ8N7U6 833 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 ASCC1Q8N9N2 400 aaKnown RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 PCSK9Q8NBP7 692 aaKnown RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 OR7G1Q8NGA0 311 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 METTL6Q8TCB7 284 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 PHOSPHO2Q8TCD6 241 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 MCOLN3Q8TDD5 553 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 SLC13A3Q8WWT9 602 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 AP3S1Q92572 193 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 KCNJ9Q92806 393 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 KIAA1143Q96AT1 154 aaPredicted RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 YIPF6Q96EC8 236 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 MYO19Q96H55 970 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 SCLYQ96I15 445 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 PIWIL1Q96J94 861 aaKnown RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 UROC1Q96N76 676 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 COL21A1Q96P44 957 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 AGAP4Q96P64 663 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 DEPDC7Q96QD5 511 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 ATOH8Q96SQ7 321 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 SEPHS2Q99611 448 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 ZBED2Q9BTP6 218 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 ADGRE3Q9BY15 652 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 DGCR6LQ9BY27 220 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 DPY30Q9C005 99 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 NXF2Q9GZY0 626 aaKnown RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 HOXD1Q9GZZ0 328 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 NUAK2Q9H093 628 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 TUT1Q9H6E5 874 aaKnown RBP5.71□□□□□ -1.5
CHD4-206ENST00000536999 ZNF556Q9HAH1 456 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 SP110Q9HB58 689 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 NEK6Q9HC98 313 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 CYP4F12Q9HCS2 524 aa5.71□□□□□ -1.5
CHD4-206ENST00000536999 IL1RAPQ9NPH3 570 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms