RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 SENP1Q9P0U3 644 aa15.17■□□□□ 0.02
CNN1-202ENST00000535659 LRIT1Q9P2V4 623 aa15.17■□□□□ 0.02
CNN1-202ENST00000535659 NOVA2Q9UNW9 492 aaKnown RBP15.17■□□□□ 0.02
CNN1-202ENST00000535659 FAM186AA6NE01 2351 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 ARHGEF17Q96PE2 2063 aaPredicted RBP15.16■□□□□ 0.02
CNN1-202ENST00000535659 LY6G6EA0A0G2JKS1 128 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 CCDC189A1A4V9 331 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 RHPN2P1A8MT19 583 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 ATP8B1O43520 1251 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 NUDT21O43809 227 aaKnown RBP15.16■□□□□ 0.02
CNN1-202ENST00000535659 OPA1O60313 960 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 GSTA1P08263 222 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 HIST1H2AGP0C0S8 130 aaPredicted RBP15.16■□□□□ 0.02
CNN1-202ENST00000535659 CKMT1AP12532 417 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 TFEBP19484 476 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 HIST1H2ADP20671 130 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 CYP2A7P20853 494 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 DUSP3P51452 185 aaPredicted RBP15.16■□□□□ 0.02
CNN1-202ENST00000535659 SP140Q13342 867 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 TSNQ15631 228 aaKnown RBP15.16■□□□□ 0.02
CNN1-202ENST00000535659 TSNAXIP1Q2TAA8 658 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 KLC3Q6P597 504 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 DCUN1D3Q8IWE4 304 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 C4orf33Q8N1A6 199 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 STAG3L4Q8TBR4 150 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 HIST1H2AHQ96KK5 128 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 CNDP2Q96KP4 475 aaKnown RBP15.16■□□□□ 0.02
CNN1-202ENST00000535659 HIST1H2AJQ99878 128 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 H2AFJQ9BTM1 129 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 TRIM54Q9BYV2 358 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.16■□□□□ 0.02
CNN1-202ENST00000535659 ACBD3Q9H3P7 528 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 KIR3DX1Q9H7L2 352 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 PDE10AQ9Y233 779 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 TDRKHQ9Y2W6 561 aaKnown RBP15.16■□□□□ 0.02
CNN1-202ENST00000535659 RNF215Q9Y6U7 377 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 U3KQA8 63 aa15.16■□□□□ 0.02
CNN1-202ENST00000535659 ARID1BQ8NFD5 2236 aaPredicted RBP15.15■□□□□ 0.02
CNN1-202ENST00000535659 CPED1A4D0V7 1026 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 EME2A4GXA9 379 aaPredicted RBP15.15■□□□□ 0.02
CNN1-202ENST00000535659 NPEPPSL1A6NEC2 478 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 ARHGEF33A8MVX0 844 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 CBFA2T3O75081 653 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 ENO2P09104 434 aaPredicted RBP15.15■□□□□ 0.02
CNN1-202ENST00000535659 RBP1P09455 135 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 CKMT2P17540 419 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 CRHR1P34998 444 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 GLRBP48167 497 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 KCNC1P48547 511 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 DAB2P98082 770 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 GPR18Q14330 331 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 SBSNQ6UWP8 590 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 TMEM26Q6ZUK4 368 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 ADAMTSL2Q86TH1 951 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 EXOC3L1Q86VI1 746 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 RHEBL1Q8TAI7 183 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 ALKBH8Q96BT7 664 aaKnown RBP15.15■□□□□ 0.02
CNN1-202ENST00000535659 PTERQ96BW5 349 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 SMC6Q96SB8 1091 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 HGH1Q9BTY7 390 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 ALG9Q9H6U8 611 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 UCK1Q9HA47 277 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 EVA1BQ9NVM1 165 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 FTSJ1Q9UET6 329 aa15.15■□□□□ 0.02
CNN1-202ENST00000535659 COPEO14579 308 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 KDM1AO60341 852 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 TOP3BO95985 862 aaKnown RBP15.14■□□□□ 0.01
CNN1-202ENST00000535659 TPBGLP0DKB5 382 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 PNLIPP16233 465 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 BDKRB1P46663 353 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 GRB7Q14451 532 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 OR4D1Q15615 310 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 PHKG1Q16816 387 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 CCSMST1Q4G0I0 132 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.14■□□□□ 0.01
CNN1-202ENST00000535659 PIP4P1Q86T03 277 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 GPSM1Q86YR5 675 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 BANPQ8N9N5 519 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 OR52E1Q8NGJ3 308 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 OR9A1PQ8NGU1 263 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 CCDC138Q96M89 665 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 PKP4Q99569 1192 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 SLC38A3Q99624 504 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 CDC6Q99741 560 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 SH3GL2Q99962 352 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 RDH14Q9HBH5 336 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 TMEM216Q9P0N5 145 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 GRID1Q9ULK0 1009 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 RNF112Q9ULX5 631 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 ACTL7BQ9Y614 415 aa15.14■□□□□ 0.01
CNN1-202ENST00000535659 PABPN1LA6NDY0 278 aaKnown RBP15.13■□□□□ 0.01
CNN1-202ENST00000535659 MYO1CO00159 1063 aa15.13■□□□□ 0.01
CNN1-202ENST00000535659 GLRA3O75311 464 aa15.13■□□□□ 0.01
CNN1-202ENST00000535659 SYF2O95926 243 aaKnown RBP15.13■□□□□ 0.01
CNN1-202ENST00000535659 CREB1P16220 341 aa15.13■□□□□ 0.01
CNN1-202ENST00000535659 GPR3P46089 330 aa15.13■□□□□ 0.01
CNN1-202ENST00000535659 KPNA2P52292 529 aaKnown RBP15.13■□□□□ 0.01
CNN1-202ENST00000535659 AP1S2P56377 157 aa15.13■□□□□ 0.01
CNN1-202ENST00000535659 PPP1R3AQ16821 1122 aa15.13■□□□□ 0.01
CNN1-202ENST00000535659 AGBL2Q5U5Z8 902 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms