RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 PLA2G4EQ3MJ16 856 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 C10orf67Q8IYJ2 551 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 SYNPOQ8N3V7 929 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 SNX31Q8N9S9 440 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 RMI1Q9H9A7 625 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 SLC40A1Q9NP59 571 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 TAS2R1Q9NYW7 299 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 POLG2Q9UHN1 485 aa23.2■■□□□ 1.3
PTPMT1-205ENST00000534775 LRRC72A6NJI9 287 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 LBPP18428 481 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 IGFALSP35858 605 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 TPMTP51580 245 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 PRKCQQ04759 706 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 LRRC32Q14392 662 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 NFE2L1Q14494 772 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 PTCHD3Q3KNS1 767 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 DNAL1Q4LDG9 190 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 XKR7Q5GH72 579 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 TRIM69Q86WT6 500 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 DENND6BQ8NEG7 585 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 OR2T34Q8NGX1 318 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 RP9Q8TA86 221 aaKnown RBP23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 MARK4Q96L34 752 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 MAGEB10Q96LZ2 347 aaPredicted RBP23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 SLC29A3Q9BZD2 475 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 BTBD1Q9H0C5 482 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 DNAJC11Q9NVH1 559 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 C1orf105O95561 183 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 KRT16P08779 473 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 MAT2AP31153 395 aaKnown RBP23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 BDKRB1P46663 353 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 DGKEP52429 567 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 STX1BP61266 288 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 PPP2CBP62714 309 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 PPP2CAP67775 309 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 ZRSR2Q15696 482 aaKnown RBP23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 UNC5DQ6UXZ4 953 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 RNF165Q6ZSG1 346 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 LONP2Q86WA8 852 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 ARHGAP24Q8N264 748 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 DEFB123Q8N688 67 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 POU5F2Q8N7G0 328 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 DCBLD1Q8N8Z6 715 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 MAGEC3Q8TD91 643 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 SGK2Q9HBY8 427 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 MRPS17Q9Y2R5 130 aaKnown RBP23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 PTGDR2Q9Y5Y4 395 aa23.19■■□□□ 1.3
PTPMT1-205ENST00000534775 CACNB4O00305 520 aaPredicted RBP23.18■■□□□ 1.3
PTPMT1-205ENST00000534775 CLDN9O95484 217 aa23.18■■□□□ 1.3
PTPMT1-205ENST00000534775 MAPRE2Q15555 327 aa23.18■■□□□ 1.3
PTPMT1-205ENST00000534775 XKR5Q6UX68 686 aa23.18■■□□□ 1.3
PTPMT1-205ENST00000534775 SPATA19Q7Z5L4 167 aa23.18■■□□□ 1.3
PTPMT1-205ENST00000534775 KLHDC8AQ8IYD2 350 aa23.18■■□□□ 1.3
PTPMT1-205ENST00000534775 HMGB4Q8WW32 186 aa23.18■■□□□ 1.3
PTPMT1-205ENST00000534775 MCUR1Q96AQ8 359 aa23.18■■□□□ 1.3
PTPMT1-205ENST00000534775 APOOQ9BUR5 198 aa23.18■■□□□ 1.3
PTPMT1-205ENST00000534775 ITM2CQ9NQX7 267 aa23.18■■□□□ 1.3
PTPMT1-205ENST00000534775 STOX2Q9P2F5 926 aaPredicted RBP23.18■■□□□ 1.3
PTPMT1-205ENST00000534775 ZNHIT2Q9UHR6 403 aa23.18■■□□□ 1.3
PTPMT1-205ENST00000534775 PRDM4Q9UKN5 801 aa23.18■■□□□ 1.3
PTPMT1-205ENST00000534775 PRKAB1Q9Y478 270 aa23.18■■□□□ 1.3
PTPMT1-205ENST00000534775 CHURC1-FNTBB4DL54 471 aa23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 SLC31A1O15431 190 aa23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 CHRNB1P11230 501 aa23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 IL9P15248 144 aa23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 CYLC2Q14093 348 aaPredicted RBP23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 HABP4Q5JVS0 413 aaKnown RBP23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 FAM219BQ5XKK7 198 aa23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 OGFOD2Q6N063 350 aa23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 AGTRAPQ6RW13 159 aa23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 IL27RAQ6UWB1 636 aa23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 PDZD3Q86UT5 571 aa23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 RBM15BQ8NDT2 890 aaKnown RBP23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 PKP4Q99569 1192 aa23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 MIPEPQ99797 713 aa23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 OR52A5Q9H2C5 316 aa23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 ACTR8Q9H981 624 aa23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 CA14Q9ULX7 337 aa23.17■■□□□ 1.3
PTPMT1-205ENST00000534775 GSC2O15499 205 aa23.16■■□□□ 1.3
PTPMT1-205ENST00000534775 HOXC4P09017 264 aaPredicted RBP23.16■■□□□ 1.3
PTPMT1-205ENST00000534775 ACADLP28330 430 aa23.16■■□□□ 1.3
PTPMT1-205ENST00000534775 ZXDCQ2QGD7 858 aaPredicted RBP23.16■■□□□ 1.3
PTPMT1-205ENST00000534775 GGTA1PQ4G0N0 100 aa23.16■■□□□ 1.3
PTPMT1-205ENST00000534775 FAM83HQ6ZRV2 1179 aaPredicted RBP23.16■■□□□ 1.3
PTPMT1-205ENST00000534775 TIMM29Q9BSF4 260 aa23.16■■□□□ 1.3
PTPMT1-205ENST00000534775 RTKNQ9BST9 563 aa23.16■■□□□ 1.3
PTPMT1-205ENST00000534775 CADM1Q9BY67 442 aaKnown RBP23.16■■□□□ 1.3
PTPMT1-205ENST00000534775 ATG10Q9H0Y0 220 aa23.16■■□□□ 1.3
PTPMT1-205ENST00000534775 USP36Q9P275 1121 aaKnown RBP23.16■■□□□ 1.3
PTPMT1-205ENST00000534775 SLC17A4Q9Y2C5 497 aa23.16■■□□□ 1.3
PTPMT1-205ENST00000534775 PCYT1BQ9Y5K3 369 aaPredicted RBP23.16■■□□□ 1.3
PTPMT1-205ENST00000534775 DOCK9Q9BZ29 2069 aa23.16■■□□□ 1.3
PTPMT1-205ENST00000534775 LOC100653049A0A140TA62 436 aa23.15■■□□□ 1.3
PTPMT1-205ENST00000534775 PSMD12O00232 456 aaPredicted RBP23.15■■□□□ 1.3
PTPMT1-205ENST00000534775 KCNJ13O60928 360 aa23.15■■□□□ 1.3
PTPMT1-205ENST00000534775 RASSF9O75901 435 aa23.15■■□□□ 1.3
PTPMT1-205ENST00000534775 KRT34O76011 436 aa23.15■■□□□ 1.3
PTPMT1-205ENST00000534775 PRR35P0CG20 571 aa23.15■■□□□ 1.3
PTPMT1-205ENST00000534775 ACSL1P33121 698 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms