RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 PLEKP08567 350 aaPredicted RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 SETSIPP0DME0 302 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 HKR1P10072 659 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 FOLR1P15328 257 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 TNFAIP3P21580 790 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 PTPN4P29074 926 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 OR1E1P30953 314 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 CCR1P32246 355 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 GTF2H1P32780 548 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 ACTR1BP42025 376 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 STAT1P42224 750 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 GPR3P46089 330 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 RPL34P49207 117 aaKnown RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 ACTR1AP61163 376 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 PPP1CAP62136 330 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 SNRPFP62306 86 aaKnown RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 YWHAZP63104 245 aaKnown RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 CDK17Q00537 523 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 OCRLQ01968 901 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 TLE4Q04727 773 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 Q0VFX4 171 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 ART3Q13508 389 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 CUL2Q13617 745 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 ATP1A4Q13733 1029 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 LAMB3Q13751 1172 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 CHRNA6Q15825 494 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 CNGA2Q16280 664 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 KYNUQ16719 465 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 VWA2Q5GFL6 755 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 OTUD1Q5VV17 481 aaPredicted RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 DENND2CQ68D51 928 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 PLEKHA7Q6IQ23 1121 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 PWWP2BQ6NUJ5 590 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 RETSATQ6NUM9 610 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 PNCKQ6P2M8 343 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 ABHD17CQ6PCB6 329 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 NCCRP1Q6ZVX7 275 aaPredicted RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 UNC13DQ70J99 1090 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 MARK2Q7KZI7 788 aaKnown RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 RRAGAQ7L523 313 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 FGD2Q7Z6J4 655 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 TRIM74Q86UV6 250 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 CAMK1DQ8IU85 385 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 PHYKPLQ8IUZ5 450 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 IQCKQ8N0W5 287 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 ZBTB2Q8N680 514 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 ARFGAP1Q8N6T3 406 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 PCDH20Q8N6Y1 951 aaKnown RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 DCAF4L2Q8NA75 395 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 SLC38A9Q8NBW4 561 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 ST6GALNAC3Q8NDV1 305 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 GRHL3Q8TE85 626 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 SLC37A2Q8TED4 501 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 UBE2Q2Q8WVN8 375 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 RAB7BQ96AH8 199 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 STAMBPL1Q96FJ0 436 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 HSFY1Q96LI6 401 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 ZSCAN31Q96LW9 406 aaPredicted RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 CCDC114Q96M63 670 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 TGM7Q96PF1 710 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 SMIM14Q96QK8 99 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 PPP1R9BQ96SB3 815 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 TTC1Q99614 292 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 SMAD5Q99717 465 aaKnown RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 ZPBPQ9BS86 351 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 MLPHQ9BV36 600 aaPredicted RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 SPATA5L1Q9BVQ7 753 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 IMPG2Q9BZV3 1241 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 ILKAPQ9H0C8 392 aaPredicted RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 TKTL2Q9H0I9 626 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 CHST8Q9H2A9 424 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 LIME1Q9H400 295 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 POPDC2Q9HBU9 364 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 TMEM8AQ9HCN3 771 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 AKIP1Q9NQ31 210 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 PIGVQ9NUD9 493 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 ARHGEF38Q9NXL2 777 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 DDX56Q9NY93 547 aaKnown RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 OGFRQ9NZT2 677 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 SAMD15Q9P1V8 674 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 SH3BGRL2Q9UJC5 107 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 PHTF1Q9UMS5 762 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 B3GNT3Q9Y2A9 372 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 RPH3AQ9Y2J0 694 aaPredicted RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 ZKSCAN5Q9Y2L8 839 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 PCDHGA6Q9Y5G7 932 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 TP53BP1Q12888 1972 aaPredicted RBP2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 SCN8AQ9UQD0 1980 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 MXRA5Q9NR99 2828 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 TRPM6Q9BX84 2022 aa2.92□□□□□ -1.94
CHMP4A-208ENST00000534106 ABCA4P78363 2273 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 AKAP6Q13023 2319 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 MYH10P35580 1976 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 MYH11P35749 1972 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 RTTNQ86VV8 2226 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 TRGV8A0A0C4DH27 118 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 ILVBLA1L0T0 632 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 HEATR9A2RTY3 570 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 UNC119BA6NIH7 251 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 TMEM200CA6NKL6 621 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms