RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 XAB2Q9HCS7 855 aaKnown RBP8.49□□□□□ -1.05
COPB1-210ENST00000533533 SLC40A1Q9NP59 571 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 LHX9Q9NQ69 397 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 CATSPERZQ9NTU4 200 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 POT1Q9NUX5 634 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 PLEKHB1Q9UF11 243 aaPredicted RBP8.49□□□□□ -1.05
COPB1-210ENST00000533533 EPHA6Q9UF33 1036 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 VPS4AQ9UN37 437 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 PSMD13Q9UNM6 376 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 NEU2Q9Y3R4 380 aa8.49□□□□□ -1.05
COPB1-210ENST00000533533 ZGRF1Q86YA3 2104 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 OR52A4PA6NMU1 304 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 GOLGA8KD6RF30 607 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 GOLGA8TH3BQL2 631 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 CD3EAPO15446 510 aaKnown RBP8.48□□□□□ -1.05
COPB1-210ENST00000533533 NDUFS3O75489 264 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 DNAJB5O75953 348 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 AGFG2O95081 481 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 VAPBO95292 243 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 TIAF1O95411 115 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 POLBP06746 335 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 BRAFP15056 766 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 NELFEP18615 380 aaKnown RBP8.48□□□□□ -1.05
COPB1-210ENST00000533533 PAMP19021 973 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 GNLYP22749 145 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 FOXN2P32314 431 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 HALP42357 657 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 MAGEA6P43360 314 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 GPR18Q14330 331 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 NFE2L1Q14494 772 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 BBS9Q3SYG4 887 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 AARS2Q5JTZ9 985 aaKnown RBP8.48□□□□□ -1.05
COPB1-210ENST00000533533 RNASEH2BQ5TBB1 312 aaKnown RBP8.48□□□□□ -1.05
COPB1-210ENST00000533533 FHL5Q5TD97 284 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 LYPLAL1Q5VWZ2 237 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 IRGCQ6NXR0 463 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 CYB5D1Q6P9G0 228 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 ZNF449Q6P9G9 518 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 WASH2PQ6VEQ5 465 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 FAM92BQ6ZTR7 304 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 MAATS1Q7Z4T9 603 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 LDB1Q86U70 411 aaPredicted RBP8.48□□□□□ -1.05
COPB1-210ENST00000533533 CAND1Q86VP6 1230 aaKnown RBP8.48□□□□□ -1.05
COPB1-210ENST00000533533 RBM12BQ8IXT5 1001 aaKnown RBP8.48□□□□□ -1.05
COPB1-210ENST00000533533 PIANPQ8IYJ0 282 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 CFAP206Q8IYR0 622 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 CLDN19Q8N6F1 224 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 NAT8LQ8N9F0 302 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 MCUQ8NE86 351 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 CPT1CQ8TCG5 803 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 CT55Q8WUE5 264 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 SEC14L1Q92503 715 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 ZNF669Q96BR6 464 aaPredicted RBP8.48□□□□□ -1.05
COPB1-210ENST00000533533 CXorf40BQ96DE9 158 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 MFSD3Q96ES6 412 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 SNF8Q96H20 258 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 C19orf43Q9BQ61 176 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 TRIM55Q9BYV6 548 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 RAB33BQ9H082 229 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 DPH5Q9H2P9 285 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 ACTL8Q9H568 366 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 VPS37BQ9H9H4 285 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 PDE7BQ9NP56 450 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 WASH6PQ9NQA3 447 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 SOX13Q9UN79 622 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 SNX24Q9Y343 169 aa8.48□□□□□ -1.05
COPB1-210ENST00000533533 TRBV5-4A0A0C4DH59 114 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 UBA6A0AVT1 1052 aaPredicted RBP8.47□□□□□ -1.05
COPB1-210ENST00000533533 MGAT4DA6NG13 374 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 AGAP14A8MT82 685 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 F8W8V4 182 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 KIF2AO00139 706 aaPredicted RBP8.47□□□□□ -1.05
COPB1-210ENST00000533533 OR1I1O60431 355 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 KCNJ13O60928 360 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 BANF1O75531 89 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 OR56A5P0C7T3 313 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 MLNP12872 115 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 NSG1P42857 185 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 ITGA8P53708 1063 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 CSE1LP55060 971 aaKnown RBP8.47□□□□□ -1.05
COPB1-210ENST00000533533 TUBB3Q13509 450 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 THOC5Q13769 683 aaKnown RBP8.47□□□□□ -1.05
COPB1-210ENST00000533533 KRT33BQ14525 404 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 BRD3Q15059 726 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 SYTL3Q4VX76 610 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 DNAJC21Q5F1R6 531 aaKnown RBP8.47□□□□□ -1.05
COPB1-210ENST00000533533 HP1BP3Q5SSJ5 553 aaPredicted RBP8.47□□□□□ -1.05
COPB1-210ENST00000533533 AGAP9Q5VTM2 703 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 PWWP2BQ6NUJ5 590 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 FAM83HQ6ZRV2 1179 aaPredicted RBP8.47□□□□□ -1.05
COPB1-210ENST00000533533 SDCCAG8Q86SQ7 713 aaPredicted RBP8.47□□□□□ -1.05
COPB1-210ENST00000533533 THAP4Q8WY91 577 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 SLCO2A1Q92959 643 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 PEX13Q92968 403 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 FCRL4Q96PJ5 515 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 TRIM56Q9BRZ2 755 aaKnown RBP8.47□□□□□ -1.05
COPB1-210ENST00000533533 SLC25A23Q9BV35 468 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 KIFC1Q9BW19 673 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 GPR87Q9BY21 358 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 AKIRIN1Q9H9L7 192 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms