RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 PLEKHN1Q494U1 663 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 ANKRD20A4Q4UJ75 823 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 PYCR3Q53H96 274 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 ARMC12Q5T9G4 340 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 STEAP4Q687X5 459 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 RAET1GQ6H3X3 334 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 IYDQ6PHW0 289 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 DOK6Q6PKX4 331 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 CES3Q6UWW8 571 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 GALNT13Q8IUC8 556 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 LPCAT1Q8NF37 534 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 FBF1Q8TES7 1133 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 SMAD5Q99717 465 aaKnown RBP11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 KIFC1Q9BW19 673 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 NUDT9Q9BW91 350 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 ADGRE3Q9BY15 652 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 ACBD3Q9H3P7 528 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 CHRAC1Q9NRG0 131 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 GPR83Q9NYM4 423 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 C5AR2Q9P296 337 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 SOX13Q9UN79 622 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 B3GNT3Q9Y2A9 372 aa11.05□□□□□ -0.64
TRAPPC4-213ENST00000533149 KIR2DS5A0A0G2JLQ3 304 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 A0A0G2JNG1 304 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 FAM237BA0A1B0GVD1 139 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 ANKRD66B4E2M5 251 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 KIR2DS3K7RE56 304 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 TRAFD1O14545 582 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 HTRA2O43464 458 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 POLBP06746 335 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 PIRTP0C851 137 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 SEPHS1P49903 392 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 EIF3BP55884 814 aaKnown RBP11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 SH3BP2P78314 561 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 PDE1BQ01064 536 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 ZNF844Q08AG5 666 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 IL10RAQ13651 578 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 KIR2DS5Q14953 304 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 CEP85LQ5SZL2 805 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 SPNS3Q6ZMD2 512 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 CYS1Q717R9 158 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 ST6GALNAC3Q8NDV1 305 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 PPHLN1Q8NEY8 458 aaKnown RBP11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 PIH1D2Q8WWB5 315 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 DTD2Q96FN9 168 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 FCRL4Q96PJ5 515 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 SMIM14Q96QK8 99 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 RUFY1Q96T51 708 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 BARD1Q99728 777 aaKnown RBP11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 TMEM109Q9BVC6 243 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 ROPN1BQ9BZX4 212 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 ROPN1Q9HAT0 212 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 PDE7BQ9NP56 450 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 AGPAT4Q9NRZ5 378 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 B4GALT6Q9UBX8 382 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 TCAF1Q9Y4C2 921 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 COPG1Q9Y678 874 aaKnown RBP11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 FAM169AQ9Y6X4 670 aa11.04□□□□□ -0.64
TRAPPC4-213ENST00000533149 A0A1W2PQ67 120 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 TCRBV9S1A1TA0A576 114 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 TLDC2A0PJX2 215 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 CCDC78A2IDD5 438 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 LILRA5A6NI73 299 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 OR5K4A6NMS3 321 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 SOCS5O75159 536 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 RASSF9O75901 435 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 USP1O94782 785 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 EML2O95834 649 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 NMBRP28336 390 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 ETV3P41162 512 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 EPHB1P54762 984 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 GFERP55789 205 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 RPL26P61254 145 aaKnown RBP11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 RPS18P62269 152 aaKnown RBP11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 PTPRRQ15256 657 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 CNGA3Q16281 694 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 SPANXN3Q5MJ09 141 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 ARMC3Q5W041 872 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 TRMT10BQ6PF06 316 aaKnown RBP11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 MED25Q71SY5 747 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 BPHLQ86WA6 291 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 TMEM102Q8N9M5 508 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 GSDMBQ8TAX9 411 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 BRSK1Q8TDC3 778 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 BLOC1S5Q8TDH9 187 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 ZNF669Q96BR6 464 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 MFSD3Q96ES6 412 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 ZNF778Q96MU6 729 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 TBC1D10AQ9BXI6 508 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 ILKAPQ9H0C8 392 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 UCK1Q9HA47 277 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 MRM3Q9HC36 420 aaKnown RBP11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 MOCS1Q9NZB8 636 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 RPL26L1Q9UNX3 145 aaKnown RBP11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 FARSAQ9Y285 508 aaKnown RBP11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 TMEM98Q9Y2Y6 226 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 SPO11Q9Y5K1 396 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 CROCCQ5TZA2 2017 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 APCP25054 2843 aa11.03□□□□□ -0.64
TRAPPC4-213ENST00000533149 ADGRG4Q8IZF6 3080 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms