RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 CCDC70Q6NSX1 233 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 TAF8Q7Z7C8 310 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 SPPL2CQ8IUH8 684 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 CDKL3Q8IVW4 592 aaPredicted RBP6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 LILRA2Q8N149 483 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 FAM46DQ8NEK8 389 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 BLOC1S5Q8TDH9 187 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 NAT14Q8WUY8 206 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 PATE1Q8WXA2 126 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 RNF31Q96EP0 1072 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 MS4A14Q96JA4 679 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 SPATA13Q96N96 652 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 DIRC2Q96SL1 478 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 CMKLR1Q99788 373 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 SPATA16Q9BXB7 569 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 ADNPQ9H2P0 1102 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 IL26Q9NPH9 171 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 RRAGDQ9NQL2 400 aaPredicted RBP6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 KCND1Q9NSA2 647 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 PIH1D1Q9NWS0 290 aaKnown RBP6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 TRMT1Q9NXH9 659 aaKnown RBP6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 KCTD5Q9NXV2 234 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 PKD2L2Q9NZM6 624 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 IL17CQ9P0M4 197 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 ATXN10Q9UBB4 475 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 SRPK3Q9UPE1 567 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 ARL5AQ9Y689 179 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 PRRC2CQ9Y520 2896 aaKnown RBP6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 SETD2Q9BYW2 2564 aaPredicted RBP6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 ITPR3Q14573 2671 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 FBN2P35556 2912 aa6.88□□□□□ -1.31
TRIM53CP-201ENST00000531490 USP27XA6NNY8 438 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 TMX2-CTNND1H3BSU7 103 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 CCL22O00626 93 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 GAPDHSO14556 408 aaPredicted RBP6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 B4GAT1O43505 415 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 CEP104O60308 925 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 ANXA9O76027 345 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 SLC25A14O95258 325 aaPredicted RBP6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 FGGP02679 453 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 IVLP07476 585 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 ZNF8P17098 575 aaPredicted RBP6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 KELP23276 732 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 HMGCLP35914 325 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 GRIA1P42261 906 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 CCR10P46092 362 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 TERF1P54274 439 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 GEMP55040 296 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 OR1D5P58170 312 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 CHRNEQ04844 493 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 CHRNA6Q15825 494 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 PARP6Q2NL67 630 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 ATP13A5Q4VNC0 1218 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 CERCAMQ5T4B2 595 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 ATP1A1-AS1Q5TC04 95 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 SLC30A9Q6PML9 568 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 LVRNQ6Q4G3 990 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 CHST15Q7LFX5 561 aaPredicted RBP6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 GLT6D1Q7Z4J2 308 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 SPRED1Q7Z699 444 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 ADGRG6Q86SQ4 1221 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 GKN2Q86XP6 184 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 KLHDC8BQ8IXV7 354 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 RAVER1Q8IY67 606 aaKnown RBP6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 UNC5BQ8IZJ1 945 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 FSTL5Q8N475 847 aaPredicted RBP6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 ANKS4BQ8N8V4 417 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 GPR156Q8NFN8 814 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 ATL2Q8NHH9 583 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 C9orf43Q8TAL5 461 aaPredicted RBP6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 MIB2Q96AX9 1013 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 TBATAQ96M53 351 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 NUDT22Q9BRQ3 303 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 TGIF2Q9GZN2 237 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 OR2AG1Q9H205 316 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 CARD9Q9H257 536 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 ACBD3Q9H3P7 528 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 DPEP2Q9H4A9 486 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 PRR13Q9NZ81 148 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 SMARCAL1Q9NZC9 954 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 TAAR2Q9P1P5 351 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 SLC23A2Q9UGH3 650 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 ZNHIT2Q9UHR6 403 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 ANAPC2Q9UJX6 822 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 ZNF148Q9UQR1 794 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 AAR2Q9Y312 384 aaKnown RBP6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 C2CD3Q4AC94 2353 aa6.87□□□□□ -1.31
TRIM53CP-201ENST00000531490 RGSL1A5PLK6 1076 aa6.86□□□□□ -1.31
TRIM53CP-201ENST00000531490 NOTOA8MTQ0 251 aa6.86□□□□□ -1.31
TRIM53CP-201ENST00000531490 B4DGG1 531 aa6.86□□□□□ -1.31
TRIM53CP-201ENST00000531490 STMND1H3BQB6 276 aa6.86□□□□□ -1.31
TRIM53CP-201ENST00000531490 PPM1DO15297 605 aa6.86□□□□□ -1.31
TRIM53CP-201ENST00000531490 ZSCAN12O43309 604 aa6.86□□□□□ -1.31
TRIM53CP-201ENST00000531490 NUAK1O60285 661 aa6.86□□□□□ -1.31
TRIM53CP-201ENST00000531490 STK10O94804 968 aaKnown RBP6.86□□□□□ -1.31
TRIM53CP-201ENST00000531490 IFNB1P01574 187 aa6.86□□□□□ -1.31
TRIM53CP-201ENST00000531490 FGF3P11487 239 aaPredicted RBP6.86□□□□□ -1.31
TRIM53CP-201ENST00000531490 HLA-DPA1P20036 260 aa6.86□□□□□ -1.31
TRIM53CP-201ENST00000531490 STIP1P31948 543 aaKnown RBP6.86□□□□□ -1.31
TRIM53CP-201ENST00000531490 RPL22P35268 128 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms