RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 SMURF1Q9HCE7 757 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 TMEM39AQ9NV64 488 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 EVA1BQ9NVM1 165 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 ZNF224Q9NZL3 707 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 PCDH10Q9P2E7 1040 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 HRH3Q9Y5N1 445 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 ACTL7AQ9Y615 435 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 RALGAPA2Q2PPJ7 1873 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 MROH6A6NGR9 719 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 BTN3A3O00478 584 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 LDOC1O95751 146 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-214ENST00000530886 CYP2F1P24903 491 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 HLA-FP30511 346 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 CLCNKAP51800 687 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 RUNX1T1Q06455 604 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 CDH17Q12864 832 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 PON2Q15165 354 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 QPRTQ15274 297 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 TKFCQ3LXA3 575 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 ALFQ53S48 1182 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 TECRLQ5HYJ1 363 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 C6orf132Q5T0Z8 1188 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 GPRIN3Q6ZVF9 776 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 RASAL3Q86YV0 1011 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 MFSD6LQ8IWD5 586 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 CHPFQ8IZ52 775 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 YIPF5Q969M3 257 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 INTS7Q9NVH2 962 aaKnown RBP7.98□□□□□ -1.13
CSDE1-214ENST00000530886 COQ3Q9NZJ6 369 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 MUTYHQ9UIF7 546 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 LEF1Q9UJU2 399 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-214ENST00000530886 STON1Q9Y6Q2 735 aa7.98□□□□□ -1.13
CSDE1-214ENST00000530886 A0A1W2PQ09 198 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 MUSKO15146 869 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 PGK1P00558 417 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 F7P08709 466 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-214ENST00000530886 GRK5P34947 590 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 OR4D2P58180 307 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 RRAS2P62070 204 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-214ENST00000530886 ELP6Q0PNE2 266 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 USP10Q14694 798 aaKnown RBP7.97□□□□□ -1.13
CSDE1-214ENST00000530886 TIGD6Q17RP2 521 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 KIF19Q2TAC6 998 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 GNASQ5JWF2 1037 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 FAM102BQ5T8I3 360 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 SHQ1Q6PI26 577 aaKnown RBP7.97□□□□□ -1.13
CSDE1-214ENST00000530886 LIPIQ6XZB0 460 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 USP50Q70EL3 339 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-214ENST00000530886 DPP9Q86TI2 863 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 BBS7Q8IWZ6 715 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 DTWD1Q8N5C7 304 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 CLEC4DQ8WXI8 215 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 SGTBQ96EQ0 304 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 TRMT61AQ96FX7 289 aaKnown RBP7.97□□□□□ -1.13
CSDE1-214ENST00000530886 ATXN7L3BQ96GX2 97 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 SYNDIG1Q9H7V2 258 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 TMCC3Q9ULS5 477 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 SCML1Q9UN30 329 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 NEUROG3Q9Y4Z2 214 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 GPR45Q9Y5Y3 372 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 A8MT66 165 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 POLRMTO00411 1230 aaKnown RBP7.97□□□□□ -1.13
CSDE1-214ENST00000530886 RGS5O15539 181 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 HS6ST1O60243 411 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 KPNA6O60684 536 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 HUS1O60921 280 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 FAM20BO75063 409 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 ERN1O75460 977 aaKnown RBP7.97□□□□□ -1.13
CSDE1-214ENST00000530886 NPM3O75607 178 aaKnown RBP7.97□□□□□ -1.13
CSDE1-214ENST00000530886 CST1P01037 141 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 PFKMP08237 780 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 PRR35P0CG20 571 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 BRCC3P46736 316 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 GLRBP48167 497 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 CDH8P55286 799 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 TGFB2P61812 414 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 SNRPD2P62316 118 aaKnown RBP7.97□□□□□ -1.13
CSDE1-214ENST00000530886 NFKB2Q00653 900 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 TSC22D1Q15714 1073 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 PRSS36Q5K4E3 855 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 HHIPL2Q6UWX4 724 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 SPATA19Q7Z5L4 167 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 OR5T2Q8NGG2 359 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 RPL10LQ96L21 214 aaKnown RBP7.97□□□□□ -1.13
CSDE1-214ENST00000530886 C3orf30Q96M34 536 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 ADPGKQ9BRR6 497 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 TBCDQ9BTW9 1192 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 BCO2Q9BYV7 579 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-214ENST00000530886 FBRSL1Q9HCM7 1045 aaKnown RBP7.97□□□□□ -1.13
CSDE1-214ENST00000530886 PCDHB16Q9NRJ7 776 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 BTG4Q9NY30 223 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 KIF25Q9UIL4 384 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 RAB23Q9ULC3 237 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 RIMKLBQ9ULI2 386 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 SHROOM3Q8TF72 1996 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 ERI2A8K979 691 aaKnown RBP7.97□□□□□ -1.13
CSDE1-214ENST00000530886 PITPNM1O00562 1244 aa7.97□□□□□ -1.13
CSDE1-214ENST00000530886 UBFD1O14562 309 aaKnown RBP7.97□□□□□ -1.13
CSDE1-214ENST00000530886 TGM6O95932 706 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms