RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 TSSK1BQ9BXA7 367 aa20.22■□□□□ 0.83
SMPD1-204ENST00000530395 TSGA10Q9BZW7 698 aa20.22■□□□□ 0.83
SMPD1-204ENST00000530395 ETNK1Q9HBU6 452 aa20.22■□□□□ 0.83
SMPD1-204ENST00000530395 OR6C2Q9NZP2 312 aa20.22■□□□□ 0.83
SMPD1-204ENST00000530395 RIMKLBQ9ULI2 386 aa20.22■□□□□ 0.83
SMPD1-204ENST00000530395 G3BP2Q9UN86 482 aaKnown RBP20.22■□□□□ 0.83
SMPD1-204ENST00000530395 ZNF148Q9UQR1 794 aa20.22■□□□□ 0.83
SMPD1-204ENST00000530395 PLAAQ9Y263 795 aa20.22■□□□□ 0.83
SMPD1-204ENST00000530395 PADI2Q9Y2J8 665 aa20.22■□□□□ 0.83
SMPD1-204ENST00000530395 TDRKHQ9Y2W6 561 aaKnown RBP20.22■□□□□ 0.83
SMPD1-204ENST00000530395 RP1L1Q8IWN7 2480 aaPredicted RBP20.22■□□□□ 0.83
SMPD1-204ENST00000530395 GOLGA6L6A8MZA4 724 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 ZNF749O43361 778 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 UGT2B7P16662 529 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 ADRA1DP25100 572 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 ACADLP28330 430 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 CDC25BP30305 580 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 PPARGP37231 505 aaPredicted RBP20.21■□□□□ 0.83
SMPD1-204ENST00000530395 CCL11P51671 97 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 UBAP2LQ14157 1087 aaKnown RBP20.21■□□□□ 0.83
SMPD1-204ENST00000530395 NCF4Q15080 339 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 TSTD2Q5T7W7 516 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 LCN10Q6JVE6 187 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 FAM198BQ6UWH4 519 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 UNC5AQ6ZN44 842 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 NLRP9Q7RTR0 991 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 ADAMTS17Q8TE56 1095 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 HDAC10Q969S8 669 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 C17orf62Q9BQA9 187 aa20.21■□□□□ 0.83
SMPD1-204ENST00000530395 SNRNP200O75643 2136 aaKnown RBP20.2■□□□□ 0.82
SMPD1-204ENST00000530395 SLC5A10A0PJK1 596 aa20.2■□□□□ 0.82
SMPD1-204ENST00000530395 TMEM63AO94886 807 aa20.2■□□□□ 0.82
SMPD1-204ENST00000530395 GOT2P00505 430 aaKnown RBP20.2■□□□□ 0.82
SMPD1-204ENST00000530395 PDGFAP04085 211 aa20.2■□□□□ 0.82
SMPD1-204ENST00000530395 CHRM5P08912 532 aaPredicted RBP20.2■□□□□ 0.82
SMPD1-204ENST00000530395 MLLT10P55197 1068 aa20.2■□□□□ 0.82
SMPD1-204ENST00000530395 PTCHD3Q3KNS1 767 aa20.2■□□□□ 0.82
SMPD1-204ENST00000530395 TRIM73Q86UV7 250 aa20.2■□□□□ 0.82
SMPD1-204ENST00000530395 CCDC89Q8N998 374 aa20.2■□□□□ 0.82
SMPD1-204ENST00000530395 SPC24Q8NBT2 197 aa20.2■□□□□ 0.82
SMPD1-204ENST00000530395 OR6P1Q8NGX9 317 aa20.2■□□□□ 0.82
SMPD1-204ENST00000530395 OR4L1Q8NH43 312 aa20.2■□□□□ 0.82
SMPD1-204ENST00000530395 COL26A1Q96A83 441 aa20.2■□□□□ 0.82
SMPD1-204ENST00000530395 CHRNA10Q9GZZ6 450 aa20.2■□□□□ 0.82
SMPD1-204ENST00000530395 RAB6BQ9NRW1 208 aa20.2■□□□□ 0.82
SMPD1-204ENST00000530395 AP1M2Q9Y6Q5 423 aa20.2■□□□□ 0.82
SMPD1-204ENST00000530395 A0A0J9YY10 115 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 BHMG1C9JSJ3 638 aaPredicted RBP20.19■□□□□ 0.82
SMPD1-204ENST00000530395 OR2B3O76000 313 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 CAPN1P07384 714 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 CD97P48960 835 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 RRADP55042 308 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 PRAMEP78395 509 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 FASTKD1Q53R41 847 aaKnown RBP20.19■□□□□ 0.82
SMPD1-204ENST00000530395 AARS2Q5JTZ9 985 aaKnown RBP20.19■□□□□ 0.82
SMPD1-204ENST00000530395 NAPRTQ6XQN6 538 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 RAB43Q86YS6 212 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 SLC13A5Q86YT5 568 aaPredicted RBP20.19■□□□□ 0.82
SMPD1-204ENST00000530395 EFCAB3Q8N7B9 438 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 PPHLN1Q8NEY8 458 aaKnown RBP20.19■□□□□ 0.82
SMPD1-204ENST00000530395 PEX13Q92968 403 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 OR2A14Q96R47 310 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 DHRS4Q9BTZ2 278 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 SLC2A6Q9UGQ3 507 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 ANAPC5Q9UJX4 755 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 ZNF451Q9Y4E5 1061 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 PCDHGB7Q9Y5F8 929 aa20.19■□□□□ 0.82
SMPD1-204ENST00000530395 FER1L5A0AVI2 2057 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 TTLL8A6PVC2 850 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 KRT86O43790 486 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 OR1I1O60431 355 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 RPN2P04844 631 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 ACVR1Q04771 509 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 KIR2DS3Q14952 304 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 DEFB110Q30KQ9 67 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 DNAJC21Q5F1R6 531 aaKnown RBP20.18■□□□□ 0.82
SMPD1-204ENST00000530395 PAPD7Q5XG87 772 aaKnown RBP20.18■□□□□ 0.82
SMPD1-204ENST00000530395 MED25Q71SY5 747 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 GAS2L3Q86XJ1 694 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 TMEM102Q8N9M5 508 aaPredicted RBP20.18■□□□□ 0.82
SMPD1-204ENST00000530395 C1orf54Q8WWF1 131 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 FAM60AQ9NP50 221 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 MLXIPLQ9NP71 852 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 CASS4Q9NQ75 786 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 IRAK4Q9NWZ3 460 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 SPHK1Q9NYA1 384 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 PAK5Q9P286 719 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 ANKMY1Q9P2S6 941 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 GPN3Q9UHW5 284 aaPredicted RBP20.18■□□□□ 0.82
SMPD1-204ENST00000530395 GUCA1BQ9UMX6 200 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 TCAF1Q9Y4C2 921 aa20.18■□□□□ 0.82
SMPD1-204ENST00000530395 USP9XQ93008 2570 aaPredicted RBP20.17■□□□□ 0.82
SMPD1-204ENST00000530395 ISM1B1AKI9 464 aa20.17■□□□□ 0.82
SMPD1-204ENST00000530395 APRTP07741 180 aa20.17■□□□□ 0.82
SMPD1-204ENST00000530395 GRIA1P42261 906 aa20.17■□□□□ 0.82
SMPD1-204ENST00000530395 CSE1LP55060 971 aaKnown RBP20.17■□□□□ 0.82
SMPD1-204ENST00000530395 SNX1Q13596 522 aa20.17■□□□□ 0.82
SMPD1-204ENST00000530395 SLC5A12Q1EHB4 618 aa20.17■□□□□ 0.82
SMPD1-204ENST00000530395 FAM69BQ5VUD6 431 aa20.17■□□□□ 0.82
SMPD1-204ENST00000530395 SLC22A15Q8IZD6 547 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms