RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 PPP1R21Q6ZMI0 780 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 PLEKHM3Q6ZWE6 761 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 SPATA19Q7Z5L4 167 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 SLC9B2Q86UD5 537 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 KMT5CQ86Y97 462 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 CTAGE4Q8IX94 777 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.33□□□□□ -1.72
C11orf88-204ENST00000529661 KBTBD3Q8NAB2 608 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 RDM1Q8NG50 284 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 OR5M8Q8NGP6 311 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 OCC1Q8TAD7 63 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 KCNE4Q8WWG9 221 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 SEMA4DQ92854 862 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 MTERF3Q96E29 417 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 ERO1AQ96HE7 468 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 SFXN2Q96NB2 322 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 MUS81Q96NY9 551 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 FERMT1Q9BQL6 677 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 NEURL2Q9BR09 285 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 FZD8Q9H461 694 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 SDF2L1Q9HCN8 221 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 MYNNQ9NPC7 610 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 OSER1Q9NX31 292 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 STK26Q9P289 416 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 GRIP1Q9Y3R0 1128 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.33□□□□□ -1.72
C11orf88-204ENST00000529661 ZFP37Q9Y6Q3 630 aaPredicted RBP4.33□□□□□ -1.72
C11orf88-204ENST00000529661 DOCK7Q96N67 2140 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 HTR3EA5X5Y0 456 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 TMEM178BH3BS89 294 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 DNM1LO00429 736 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 CLDN4O14493 209 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 CRYAAP02489 173 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 TFAP2AP05549 437 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 CETPP11597 493 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 PDGFRAP16234 1089 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 ZNF23P17027 643 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 CASTP20810 708 aaKnown RBP4.32□□□□□ -1.72
C11orf88-204ENST00000529661 EEF1B2P24534 225 aaKnown RBP4.32□□□□□ -1.72
C11orf88-204ENST00000529661 MPZP25189 248 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 ATP5DP30049 168 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 GNL1P36915 607 aaPredicted RBP4.32□□□□□ -1.72
C11orf88-204ENST00000529661 AMPHP49418 695 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 PLIN5Q00G26 463 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 MDH1BQ5I0G3 518 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 OR7E24Q6IFN5 339 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 PLXDC2Q6UX71 529 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 MEX3BQ6ZN04 569 aaKnown RBP4.32□□□□□ -1.72
C11orf88-204ENST00000529661 ABI3BPQ7Z7G0 1075 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 SMIM29Q86T20 159 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 PTOV1Q86YD1 416 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 GDAP1Q8TB36 358 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 DAZLQ92904 295 aaKnown RBP4.32□□□□□ -1.72
C11orf88-204ENST00000529661 RMDN2Q96LZ7 410 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 FNBP1Q96RU3 617 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 CSTL1Q9H114 145 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 TBC1D17Q9HA65 648 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 MIOSQ9NXC5 875 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 POU2F3Q9UKI9 436 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 ABT1Q9ULW3 272 aaKnown RBP4.32□□□□□ -1.72
C11orf88-204ENST00000529661 DLGAP4Q9Y2H0 992 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 PADI2Q9Y2J8 665 aa4.32□□□□□ -1.72
C11orf88-204ENST00000529661 ARHGEF37A1IGU5 675 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 NEMP2A6NFY4 417 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 MEIS2O14770 477 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 PSMA7O14818 248 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 SLU7O95391 586 aaKnown RBP4.31□□□□□ -1.72
C11orf88-204ENST00000529661 PLGP00747 810 aaPredicted RBP4.31□□□□□ -1.72
C11orf88-204ENST00000529661 GBAP04062 536 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 ATP1A1P05023 1023 aaKnown RBP4.31□□□□□ -1.72
C11orf88-204ENST00000529661 CDH1P12830 882 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 CSF2RAP15509 400 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 ADRA2CP18825 462 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 SP100P23497 879 aaPredicted RBP4.31□□□□□ -1.72
C11orf88-204ENST00000529661 PTPN3P26045 913 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 MMP15P51511 669 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 MLLT10P55197 1068 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 TUBB4BP68371 445 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 PRKAA1Q13131 559 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 ZRANB3Q5FWF4 1079 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 OTUD3Q5T2D3 398 aaPredicted RBP4.31□□□□□ -1.72
C11orf88-204ENST00000529661 KRTAP5-11Q6L8G4 156 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 MSANTD1Q6ZTZ1 278 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 FOXL2NBQ6ZUU3 175 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 TMPRSS11FQ6ZWK6 438 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 SIX6OS1Q8N1H7 587 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 L3MBTL4Q8NA19 623 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 OR13A1Q8NGR1 328 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 LNX1Q8TBB1 728 aaPredicted RBP4.31□□□□□ -1.72
C11orf88-204ENST00000529661 MR1Q95460 341 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 CPNE1Q99829 537 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 SLX1AQ9BQ83 275 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 GPATCH1Q9BRR8 931 aaKnown RBP4.31□□□□□ -1.72
C11orf88-204ENST00000529661 C2orf40Q9H1Z8 148 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 COPS7BQ9H9Q2 264 aaPredicted RBP4.31□□□□□ -1.72
C11orf88-204ENST00000529661 ACKR4Q9NPB9 350 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 KLHL1Q9NR64 748 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.31□□□□□ -1.72
C11orf88-204ENST00000529661 POMT1Q9Y6A1 747 aa4.31□□□□□ -1.72
C11orf88-204ENST00000529661 SCN5AQ14524 2016 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms