RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-209	ENST00000529372	DAPK3	O43293	454 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	CRLF1	O75462	422 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	HCAR3	P49019	387 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	ARSE	P51690	589 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	CDH6	P55285	790 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	PPP2R2B	Q00005	443 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	ALDH6A1	Q02252	535 aa	Known RBP	11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	RNFT1	Q5M7Z0	435 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	TLDC1	Q6P9B6	456 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	TMC3	Q7Z5M5	1100 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	ADGRF3	Q8IZF5	1079 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	DNAJC22	Q8N4W6	341 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	MDS2	Q8NDY4	140 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	FLVCR1-AS1	Q8TAF5	88 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	PWWP2A	Q96N64	755 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	PCDHB18P	Q96TA0	734 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	SELENOO	Q9BVL4	669 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	POLR1E	Q9GZS1	481 aa	Known RBP	11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	FANCL	Q9NW38	375 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	TRPS1	Q9UHF7	1281 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	MKL2	Q9ULH7	1088 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372	CTNND2	Q9UQB3	1225 aa		11.22	□□□□□ -0.61
PSMD13-209	ENST00000529372		A0A1B0GX78	115 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	PRRG2	O14669	202 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	MMP2	P08253	660 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	ITGAM	P11215	1152 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	CDR2	Q01850	454 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	STIM1	Q13586	685 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	PPP6R3	Q5H9R7	873 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	ERMARD	Q5T6L9	678 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	SPESP1	Q6UW49	350 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	NDUFAF7	Q7L592	441 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	GHDC	Q8N2G8	530 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	DTWD1	Q8N5C7	304 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	SIMC1	Q8NDZ2	872 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	ACVR1C	Q8NER5	493 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	SUN3	Q8TAQ9	357 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	LCN9	Q8WX39	176 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	MCEE	Q96PE7	176 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	SRMS	Q9H3Y6	488 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	SEPT11	Q9NVA2	429 aa	Known RBP	11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	ACTR10	Q9NZ32	417 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	NXT1	Q9UKK6	140 aa	Known RBP	11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	EDAR	Q9UNE0	448 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	SHOC2	Q9UQ13	582 aa		11.21	□□□□□ -0.61
PSMD13-209	ENST00000529372	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.21	□□□□□ -0.62	1e-7	■■■■■ 29.2
PSMD13-209	ENST00000529372	MPDZ	O75970	2070 aa		11.21	□□□□□ -0.62
PSMD13-209	ENST00000529372	PHF3	Q92576	2039 aa	Known RBP	11.21	□□□□□ -0.62
PSMD13-209	ENST00000529372	NSG1	A0A0A6YYJ2	146 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	MAP2K7	O14733	419 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	GPR39	O43194	453 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	MAP3K7	O43318	606 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	PIRT	P0C851	137 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	ALAS2	P22557	587 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	AMPD1	P23109	780 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	NSG1	P42857	185 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	NKX6-1	P78426	367 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	KLC1	Q07866	573 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	SNTB1	Q13884	538 aa	Known RBP	11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	SHE	Q5VZ18	495 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	TXNRD3NB	Q6F5E7	133 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	TTLL10	Q6ZVT0	673 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	MON1B	Q7L1V2	547 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	PHF13	Q86YI8	300 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	TMTC1	Q8IUR5	882 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	CLYBL	Q8N0X4	340 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	EID3	Q8N140	333 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	ATPAF2	Q8N5M1	289 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	LILRA3	Q8N6C8	439 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	BEND7	Q8N7W2	519 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	MAML1	Q92585	1016 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	SMARCE1	Q969G3	411 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	SCMH1	Q96GD3	660 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	SEC16B	Q96JE7	1060 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	VPS50	Q96JG6	964 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	SIGLEC12	Q96PQ1	595 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	TRIB3	Q96RU7	358 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	TUBGCP2	Q9BSJ2	902 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	CRB3	Q9BUF7	120 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	ADAM22	Q9P0K1	906 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	MAN1B1	Q9UKM7	699 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	NOTCH1	P46531	2555 aa		11.2	□□□□□ -0.62
PSMD13-209	ENST00000529372	BICDL2	A1A5D9	508 aa		11.19	□□□□□ -0.62
PSMD13-209	ENST00000529372	OR2AG2	A6NM03	316 aa		11.19	□□□□□ -0.62
PSMD13-209	ENST00000529372	C2orf74	A8MZ97	194 aa		11.19	□□□□□ -0.62
PSMD13-209	ENST00000529372		F8VZ95	297 aa		11.19	□□□□□ -0.62
PSMD13-209	ENST00000529372	PRPSAP2	O60256	369 aa		11.19	□□□□□ -0.62
PSMD13-209	ENST00000529372	SMC2	O95347	1197 aa		11.19	□□□□□ -0.62
PSMD13-209	ENST00000529372	MLYCD	O95822	493 aa		11.19	□□□□□ -0.62
PSMD13-209	ENST00000529372	MT-CYB	P00156	380 aa	Predicted RBP	11.19	□□□□□ -0.62
PSMD13-209	ENST00000529372	PYGM	P11217	842 aa		11.19	□□□□□ -0.62
PSMD13-209	ENST00000529372	NDUFS1	P28331	727 aa		11.19	□□□□□ -0.62
PSMD13-209	ENST00000529372	ITK	Q08881	620 aa		11.19	□□□□□ -0.62
PSMD13-209	ENST00000529372	GTF2H3	Q13889	308 aa		11.19	□□□□□ -0.62
PSMD13-209	ENST00000529372	TMEM220	Q6QAJ8	160 aa		11.19	□□□□□ -0.62
PSMD13-209	ENST00000529372	RIPOR1	Q6ZS17	1223 aa		11.19	□□□□□ -0.62
PSMD13-209	ENST00000529372	NEK10	Q6ZWH5	1172 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms