RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 NUDT4Q9NZJ9 180 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 FAM8A1Q9UBU6 413 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 SLC23A2Q9UGH3 650 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 KLF15Q9UIH9 416 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 APOBEC2Q9Y235 224 aaKnown RBP7.73□□□□□ -1.17
SSBP3-211ENST00000528787 PRKAB1Q9Y478 270 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 OARD1Q9Y530 152 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 PCM1Q15154 2024 aa7.73□□□□□ -1.17
SSBP3-211ENST00000528787 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.72□□□□□ -1.17
SSBP3-211ENST00000528787 C4orf47A7E2U8 309 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 C2orf74A8MZ97 194 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 MYO1CO00159 1063 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 CDX4O14627 284 aaPredicted RBP7.72□□□□□ -1.17
SSBP3-211ENST00000528787 GIPC1O14908 333 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 SIGLEC6O43699 453 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 KATNA1O75449 491 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 FUCA1P04066 466 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 ALDOAP04075 364 aaKnown RBP7.72□□□□□ -1.17
SSBP3-211ENST00000528787 SHBGP04278 402 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 CEACAM1P13688 526 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 CD1DP15813 335 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 PREPP48147 710 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 UBE2IP63279 158 aaKnown RBP7.72□□□□□ -1.17
SSBP3-211ENST00000528787 ABATP80404 500 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 ABRQ12979 859 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 BMPR2Q13873 1038 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 NAA30Q147X3 362 aaPredicted RBP7.72□□□□□ -1.17
SSBP3-211ENST00000528787 NR1D2Q14995 579 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 CCDC6Q16204 474 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 ACSBG2Q5FVE4 666 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 CAPN13Q6MZZ7 669 aaPredicted RBP7.72□□□□□ -1.17
SSBP3-211ENST00000528787 WDR74Q6RFH5 385 aaPredicted RBP7.72□□□□□ -1.17
SSBP3-211ENST00000528787 KANSL1Q7Z3B3 1105 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 ZNF438Q7Z4V0 828 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 TRABD2AQ86V40 505 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 AMIGO1Q86WK6 493 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 NAGSQ8N159 534 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 CHCHD4Q8N4Q1 142 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 OR9A1PQ8NGU1 263 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 HMGCLL1Q8TB92 370 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 SLC37A2Q8TED4 501 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 SMPDL3AQ92484 453 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 APOPT1Q96IL0 206 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 INSM2Q96T92 566 aaPredicted RBP7.72□□□□□ -1.17
SSBP3-211ENST00000528787 OLFM1Q99784 485 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 EGFL8Q99944 293 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 TCEAL2Q9H3H9 227 aaPredicted RBP7.72□□□□□ -1.17
SSBP3-211ENST00000528787 PCMTD2Q9NV79 361 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 CD274Q9NZQ7 290 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 SIRPGQ9P1W8 387 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 ANKMY1Q9P2S6 941 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 LRIT1Q9P2V4 623 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 EPHA6Q9UF33 1036 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 PSMD13Q9UNM6 376 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 RUVBL2Q9Y230 463 aaKnown RBP7.72□□□□□ -1.17
SSBP3-211ENST00000528787 CDYLQ9Y232 598 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 SLCO1B1Q9Y6L6 691 aa7.72□□□□□ -1.17
SSBP3-211ENST00000528787 FAM186AA6NE01 2351 aa7.71□□□□□ -1.17
SSBP3-211ENST00000528787 MAP2K7O14733 419 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 SLC30A4O14863 429 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 PRPF4O43172 522 aaKnown RBP eCLIP7.71□□□□□ -1.18
SSBP3-211ENST00000528787 PHGDHO43175 533 aaKnown RBP7.71□□□□□ -1.18
SSBP3-211ENST00000528787 NOBOXO60393 691 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 RFPL1O75677 317 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 RFPL3O75679 317 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 UBXN7O94888 489 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 C1orf105O95561 183 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 CPNE6O95741 557 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 SYF2O95926 243 aaKnown RBP7.71□□□□□ -1.18
SSBP3-211ENST00000528787 PYGBP11216 843 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 GFAPP14136 432 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 TFEBP19484 476 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 CXCR2P25025 360 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 GSTM2P28161 218 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 GCAP28676 217 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 PDHA2P29803 388 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 RPA3P35244 121 aaPredicted RBP7.71□□□□□ -1.18
SSBP3-211ENST00000528787 GRK3P35626 688 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 SERPINB5P36952 375 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 SLC19A1P41440 591 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 ALDH18A1P54886 795 aaKnown RBP7.71□□□□□ -1.18
SSBP3-211ENST00000528787 IL9RQ01113 521 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 SLC18A2Q05940 514 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 SQSTM1Q13501 440 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 TRA2AQ13595 282 aaKnown RBP eCLIP7.71□□□□□ -1.18
SSBP3-211ENST00000528787 SPIDRQ14159 915 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 CLCA4Q14CN2 919 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 SHBQ15464 509 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 TRIP6Q15654 476 aaKnown RBP7.71□□□□□ -1.18
SSBP3-211ENST00000528787 PROX2Q3B8N5 592 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.71□□□□□ -1.18
SSBP3-211ENST00000528787 C10orf62Q5T681 223 aaPredicted RBP7.71□□□□□ -1.18
SSBP3-211ENST00000528787 TCEAL6Q6IPX3 200 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 FAM83HQ6ZRV2 1179 aaPredicted RBP7.71□□□□□ -1.18
SSBP3-211ENST00000528787 CMC1Q7Z7K0 106 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 PIM3Q86V86 326 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 KMT5CQ86Y97 462 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 GATAD2AQ86YP4 633 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 CEP97Q8IW35 865 aa7.71□□□□□ -1.18
SSBP3-211ENST00000528787 SYTL1Q8IYJ3 562 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms