RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 SCRN2Q96FV2 425 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 ZNF558Q96NG5 402 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 MAGIXQ9H6Y5 334 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 ZFP14Q9HCL3 533 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 MRPL17Q9NRX2 175 aaKnown RBP10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 FARSBQ9NSD9 589 aaKnown RBP10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 PPIL1Q9Y3C6 166 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 DENND4CQ5VZ89 1909 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 TRBV5-3A0A0A0MS03 114 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 G3V2T6 193 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 H0Y858 1186 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 PQBP1O60828 265 aaKnown RBP10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 PRPS2P11908 318 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 IL1RNP18510 177 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 PRPH2P23942 346 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 GKP32189 559 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 NRIP1P48552 1158 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 RPIAP49247 311 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 CLDN8P56748 225 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 PLIN5Q00G26 463 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 PMS2P3Q13401 168 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 PLEKHG6Q3KR16 790 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 DGKKQ5KSL6 1271 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 ZNF773Q6PK81 442 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 CRTC1Q6UUV9 634 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 MSRB3Q8IXL7 192 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 SLC39A11Q8N1S5 342 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 GPR26Q8NDV2 337 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 NUDT8Q8WV74 236 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 EZH1Q92800 747 aaPredicted RBP10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 MUS81Q96NY9 551 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 OR52E6Q96RD3 313 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 COPS8Q99627 209 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 ACTR8Q9H981 624 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 POLR1BQ9H9Y6 1135 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 TLR9Q9NR96 1032 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 USE1Q9NZ43 259 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 TMEM9Q9P0T7 183 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 IFT80Q9P2H3 777 aaPredicted RBP10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 INVSQ9Y283 1065 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 MAN2B2Q9Y2E5 1009 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 PLXNB3Q9ULL4 1909 aa10.56□□□□□ -0.72
PTPMT1-204ENST00000527079 COL4A6Q14031 1691 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 NPIPB15A6NHN6 443 aaPredicted RBP10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 FAM220BPB1ANY3 271 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 CXCR6O00574 342 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 CPNE6O95741 557 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 CST1P01037 141 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 C8GP07360 202 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 BCKDHAP12694 445 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 MAPK1P28482 360 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 HNMTP50135 292 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 HNRNPFP52597 415 aaKnown RBP10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 CCL23P55773 120 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 RAB39AQ14964 217 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 PLCL1Q15111 1095 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 SGO1Q5FBB7 561 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 RBM48Q5RL73 367 aaKnown RBP10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 LRIF1Q5T3J3 769 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 SUSD1Q6UWL2 747 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 KCTD8Q6ZWB6 473 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 USP45Q70EL2 814 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 GPR149Q86SP6 731 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 ZSWIM9Q86XI8 627 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 CROCCP3Q8IVE0 287 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 MICU2Q8IYU8 434 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 B4GALNT2Q8NHY0 566 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 FBXO30Q8TB52 745 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 MRPS31Q92665 395 aaKnown RBP10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 FAM162AQ96A26 154 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 ECHDC3Q96DC8 303 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 SLC47A1Q96FL8 570 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 ASIC4Q96FT7 647 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 ING2Q9H160 280 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 KCNH6Q9H252 994 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 TNKS2Q9H2K2 1166 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 KAT8Q9H7Z6 458 aaKnown RBP10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 RMND5AQ9H871 391 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 LIN28AQ9H9Z2 209 aaKnown RBP10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 ARL15Q9NXU5 204 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 SLC25A37Q9NYZ2 338 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 LIMD1Q9UGP4 676 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 EBF1Q9UH73 591 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 SNX6Q9UNH7 406 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 TMED5Q9Y3A6 229 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 SH3BP1Q9Y3L3 701 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 IGLV3-16A0A075B6K0 115 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 A0A096LPI6 279 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 NPIPB8E9PQR5 432 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 OR56A5P0C7T3 313 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 PCNAP12004 261 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 ACPPP15309 386 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 JUNBP17275 347 aaPredicted RBP10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 RPS14P62263 151 aaKnown RBP10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 SLC7A9P82251 487 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 GRSF1Q12849 480 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 BIRC2Q13490 618 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 ENPP6Q6UWR7 440 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 THAP5Q7Z6K1 395 aa10.55□□□□□ -0.72
PTPMT1-204ENST00000527079 DEFB128Q7Z7B8 93 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms