RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 PTGIRP43119 386 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 MAP7Q14244 749 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 TMED2Q15363 201 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 TBR1Q16650 682 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 LINC00303Q3SY05 128 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 DNAJC21Q5F1R6 531 aaKnown RBP12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 RNASEH2BQ5TBB1 312 aaKnown RBP12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 PAPD7Q5XG87 772 aaKnown RBP12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 CENPUQ71F23 418 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 LRRC6Q86X45 466 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 CREG2Q8IUH2 290 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 SPNS2Q8IVW8 549 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 FAM20CQ8IXL6 584 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 C17orf53Q8N3J3 647 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 EXD3Q8N9H8 876 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 SKA2Q8WVK7 121 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 LPGAT1Q92604 370 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 ZNF501Q96CX3 271 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 SIGLEC10Q96LC7 697 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 BIRC8Q96P09 236 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 TRAPPC9Q96Q05 1148 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 PANX3Q96QZ0 392 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 NAPGQ99747 312 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 SEMA4CQ9C0C4 833 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 AKIRIN1Q9H9L7 192 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 KCND1Q9NSA2 647 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 GALPQ9UBC7 116 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 RUVBL2Q9Y230 463 aaKnown RBP12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 BTRCQ9Y297 605 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 SAR1BQ9Y6B6 198 aa12.44□□□□□ -0.42
TRAPPC4-205ENST00000525079 ZCWPW2A0A1B0GU75 182 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 CTAGE9A4FU28 777 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 ISM1B1AKI9 464 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 TK2O00142 265 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 DNALI1O14645 258 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 BANF1O75531 89 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 SCRG1O75711 98 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 C1QL1O75973 258 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 SLCO2B1O94956 709 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 S1PR4O95977 384 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 CCNYL3P0C7X3 344 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 CHRM3P20309 590 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 OGNP20774 298 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 DLSTP36957 453 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 TUBB4BP68371 445 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 CTBP1Q13363 440 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 THOC5Q13769 683 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 PTK6Q13882 451 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 TUBB2AQ13885 445 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 COL9A2Q14055 689 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 TYSND1Q2T9J0 566 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 ATP1A1-AS1Q5TC04 95 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 IZUMO3Q5VZ72 239 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 ZNF470Q6ECI4 717 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 C16orf46Q6P387 395 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 CYB5D1Q6P9G0 228 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 FAM199XQ6PEV8 388 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 SPESP1Q6UW49 350 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 OTOAQ7RTW8 1153 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 TMEM135Q86UB9 458 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 TAX1BP1Q86VP1 789 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 HOOK3Q86VS8 718 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 CILP2Q8IUL8 1156 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 TMEM126BQ8IUX1 230 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 DENND6AQ8IWF6 608 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 CARFQ8N187 725 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 LSM14AQ8ND56 463 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 GSDMBQ8TAX9 411 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 SLC45A3Q96JT2 553 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 IL17FQ96PD4 163 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 OR2A14Q96R47 310 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 TCF12Q99081 682 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 ARHGAP9Q9BRR9 750 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 TUBB2BQ9BVA1 445 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 PITPNM3Q9BZ71 974 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 FBXO6Q9NRD1 293 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 C20orf96Q9NUD7 363 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 PCYOX1Q9UHG3 505 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 CROTQ9UKG9 612 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 PADI1Q9ULC6 663 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 NFS1Q9Y697 457 aa12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRAPPC4-205ENST00000525079 KRT87PA6NCN2 255 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 ZNF891A8MT65 544 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 TMEM150CB9EJG8 249 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 KPNA5O15131 536 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 PFDN6O15212 129 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 FANCGO15287 622 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 FAM87AP0C7U9 286 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 PEBP1P30086 187 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 MAGEA3P43357 314 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 BDKRB1P46663 353 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 GRB7Q14451 532 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 KYNUQ16719 465 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 CCSMST1Q4G0I0 132 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 RNF187Q5TA31 235 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 CNSTQ6PJW8 725 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 UNC5DQ6UXZ4 953 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 CDHR3Q6ZTQ4 885 aa12.42□□□□□ -0.42
TRAPPC4-205ENST00000525079 BPHLQ86WA6 291 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms