RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 C21orf140B9A014 251 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 CREG1O75629 220 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 VAPBO95292 243 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 KRT14P02533 472 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 KLK3P07288 261 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-203ENST00000525013 SARNPP82979 210 aaKnown RBP17.96■□□□□ 0.47
CAPN1-203ENST00000525013 ABRQ12979 859 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 TMED2Q15363 201 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 PRAMEF17Q5VTA0 474 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 TRIM73Q86UV7 250 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 VRK3Q8IV63 474 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 OR1L3Q8NH93 324 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 GSDMBQ8TAX9 411 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 N4BP2L2Q92802 583 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-203ENST00000525013 MFSD3Q96ES6 412 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 KIFC1Q9BW19 673 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 ACTL8Q9H568 366 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 GRPEL1Q9HAV7 217 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 SYTL2Q9HCH5 934 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 LATS2Q9NRM7 1088 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 SPHK1Q9NYA1 384 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 OR6C2Q9NZP2 312 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 SERTAD3Q9UJW9 196 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 PCDHGA6Q9Y5G7 932 aa17.96■□□□□ 0.47
CAPN1-203ENST00000525013 TENM4Q6N022 2769 aa17.96■□□□□ 0.46
CAPN1-203ENST00000525013 AVILO75366 819 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 CHRM5P08912 532 aaPredicted RBP17.95■□□□□ 0.46
CAPN1-203ENST00000525013 FURINP09958 794 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 TPBGLP0DKB5 382 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 UGT2B7P16662 529 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 CYP2A7P20853 494 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 AOAHP28039 575 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 RPS15P62841 145 aaKnown RBP17.95■□□□□ 0.46
CAPN1-203ENST00000525013 GPS2Q13227 327 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 DNAJC21Q5F1R6 531 aaKnown RBP17.95■□□□□ 0.46
CAPN1-203ENST00000525013 TTC27Q6P3X3 843 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 CASC4Q6P4E1 433 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 MPP5Q8N3R9 675 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 RASGEF1CQ8N431 466 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 SLC38A9Q8NBW4 561 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 CPT1BQ92523 772 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 CLIP3Q96DZ5 547 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 OR2A14Q96R47 310 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 RUFY1Q96T51 708 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 NAP1L3Q99457 506 aaPredicted RBP17.95■□□□□ 0.46
CAPN1-203ENST00000525013 GPR87Q9BY21 358 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 SLC7A5P2Q9GIP4 190 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 MRM3Q9HC36 420 aaKnown RBP17.95■□□□□ 0.46
CAPN1-203ENST00000525013 GNPTGQ9UJJ9 305 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 TUBD1Q9UJT1 453 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 SOX13Q9UN79 622 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 POLHQ9Y253 713 aa17.95■□□□□ 0.46
CAPN1-203ENST00000525013 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-203ENST00000525013 ISM1B1AKI9 464 aa17.94■□□□□ 0.46
CAPN1-203ENST00000525013 GOLGA8KD6RF30 607 aa17.94■□□□□ 0.46
CAPN1-203ENST00000525013 GOLGA8TH3BQL2 631 aa17.94■□□□□ 0.46
CAPN1-203ENST00000525013 PYCARD-AS1I3L0S3 204 aa17.94■□□□□ 0.46
CAPN1-203ENST00000525013 GPC4O75487 556 aa17.94■□□□□ 0.46
CAPN1-203ENST00000525013 RPN2P04844 631 aa17.94■□□□□ 0.46
CAPN1-203ENST00000525013 PTPN4P29074 926 aa17.94■□□□□ 0.46
CAPN1-203ENST00000525013 EIF3BP55884 814 aaKnown RBP17.94■□□□□ 0.46
CAPN1-203ENST00000525013 RPS18P62269 152 aaKnown RBP17.94■□□□□ 0.46
CAPN1-203ENST00000525013 KCNJ11Q14654 390 aa17.94■□□□□ 0.46
CAPN1-203ENST00000525013 MRNIPQ6NTE8 343 aa17.94■□□□□ 0.46
CAPN1-203ENST00000525013 CDHR3Q6ZTQ4 885 aa17.94■□□□□ 0.46
CAPN1-203ENST00000525013 SDCCAG8Q86SQ7 713 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-203ENST00000525013 PTRH1Q86Y79 214 aaKnown RBP17.94■□□□□ 0.46
CAPN1-203ENST00000525013 C9orf43Q8TAL5 461 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-203ENST00000525013 SKA2Q8WVK7 121 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-203ENST00000525013 PANX3Q96QZ0 392 aa17.94■□□□□ 0.46
CAPN1-203ENST00000525013 CHST8Q9H2A9 424 aa17.94■□□□□ 0.46
CAPN1-203ENST00000525013 ACTR5Q9H9F9 607 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-203ENST00000525013 CIDEBQ9UHD4 219 aa17.94■□□□□ 0.46
CAPN1-203ENST00000525013 CDYLQ9Y232 598 aa17.94■□□□□ 0.46
CAPN1-203ENST00000525013 CCDC88CQ9P219 2028 aa17.94■□□□□ 0.46
CAPN1-203ENST00000525013 MEN1O00255 615 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 PGRMC1O00264 195 aaKnown RBP17.93■□□□□ 0.46
CAPN1-203ENST00000525013 ZSCAN12O43309 604 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 MSL3P1P0C860 447 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 COILP38432 576 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-203ENST00000525013 ITGA1P56199 1179 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 PLEKHS1Q5SXH7 462 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 ANKRD22Q5VYY1 191 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 OTOAQ7RTW8 1153 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 TMEM135Q86UB9 458 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 LRRC6Q86X45 466 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 REXO1L1PQ8IX06 675 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 GPR135Q8IZ08 494 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 SLC35F6Q8N357 371 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 C2orf73Q8N5S3 287 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-203ENST00000525013 C19orf47Q8N9M1 422 aaKnown RBP17.93■□□□□ 0.46
CAPN1-203ENST00000525013 TCTN2Q96GX1 697 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 P2RY12Q9H244 342 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 ZNF71Q9NQZ8 489 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-203ENST00000525013 SAMD15Q9P1V8 674 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 FARSAQ9Y285 508 aaKnown RBP17.93■□□□□ 0.46
CAPN1-203ENST00000525013 KCNMB2Q9Y691 235 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 MYO18BQ8IUG5 2567 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 MED13Q9UHV7 2174 aa17.93■□□□□ 0.46
CAPN1-203ENST00000525013 A0A0J9YY10 115 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms