RNA–Protein interactions for RNA: ENST00000524393.5

RBBP4-215, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-215	ENST00000524393	POLH	Q9Y253	713 aa		12.2	□□□□□ -0.46
RBBP4-215	ENST00000524393	PCDHGA6	Q9Y5G7	932 aa		12.2	□□□□□ -0.46
RBBP4-215	ENST00000524393	MRFAP1	Q9Y605	127 aa		12.2	□□□□□ -0.46
RBBP4-215	ENST00000524393	ATRX	P46100	2492 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	PIKFYVE	Q9Y2I7	2098 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	CDC14C	A4D256	554 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	ISM1	B1AKI9	464 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	PGRMC1	O00264	195 aa	Known RBP	12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	VAPB	O95292	243 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	CHRM5	P08912	532 aa	Predicted RBP	12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	HBQ1	P09105	142 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	UGT2B7	P16662	529 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	F8A1	P23610	371 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	NMBR	P28336	390 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	ITGA1	P56199	1179 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	UNC5D	Q6UXZ4	953 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	UNC5A	Q6ZN44	842 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	OTOA	Q7RTW8	1153 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	LDB1	Q86U70	411 aa	Predicted RBP	12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	DCUN1D3	Q8IWE4	304 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	RASGEF1C	Q8N431	466 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	RAB42	Q8N4Z0	105 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	C19orf47	Q8N9M1	422 aa	Known RBP	12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	CFAP61	Q8NHU2	1237 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	C9orf43	Q8TAL5	461 aa	Predicted RBP	12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	GRK7	Q8WTQ7	553 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	SKA2	Q8WVK7	121 aa	Predicted RBP	12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	SLC22A18	Q96BI1	424 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	TCTN2	Q96GX1	697 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	LRFN5	Q96NI6	719 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	TRAPPC9	Q96Q05	1148 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	KIFC1	Q9BW19	673 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	ACTL8	Q9H568	366 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	ACTR5	Q9H9F9	607 aa	Predicted RBP	12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	SYBU	Q9NX95	663 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	MARCH4	Q9P2E8	410 aa	Predicted RBP	12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	SOX13	Q9UN79	622 aa		12.19	□□□□□ -0.46
RBBP4-215	ENST00000524393	MGA	Q8IWI9	3026 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393		A0A0J9YY10	115 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	IQCF5	A8MTL0	148 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393		E7EQ34	232 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393		H3BMM5	538 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	TERT	O14746	1132 aa	Known RBP	12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	KIF5C	O60282	957 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	GPC4	O75487	556 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	PVR	P15151	417 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	RPS3	P23396	243 aa	Known RBP eCLIP	12.18	□□□□□ -0.46	3e-7	■■□□□ 13.5
RBBP4-215	ENST00000524393	AOAH	P28039	575 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	PTPN4	P29074	926 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	RAB28	P51157	221 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	EIF3B	P55884	814 aa	Known RBP	12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	ABR	Q12979	859 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	KIR2DS3	Q14952	304 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	ATP1A1-AS1	Q5TC04	95 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	FAM199X	Q6PEV8	388 aa	Predicted RBP	12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	CCDC137	Q6PK04	289 aa	Known RBP	12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	ATG14	Q6ZNE5	492 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	SYVN1	Q86TM6	617 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	KRT222	Q8N1A0	295 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	MFSD3	Q96ES6	412 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	FOPNL	Q96NB1	174 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	TCF12	Q99081	682 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	RAB11FIP5	Q9BXF6	653 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	KLHL25	Q9H0H3	589 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	XAB2	Q9HCS7	855 aa	Known RBP	12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	SLC39A10	Q9ULF5	831 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	VPS9D1	Q9Y2B5	631 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	MAN2B2	Q9Y2E5	1009 aa		12.18	□□□□□ -0.46
RBBP4-215	ENST00000524393	MAGEB16	A2A368	324 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	MKRN2OS	H3BPM6	223 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	MEN1	O00255	615 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	SLCO2B1	O94956	709 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	MLN	P12872	115 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	AGXT	P21549	392 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	PKLR	P30613	574 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	COIL	P38432	576 aa	Predicted RBP	12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	MAGEA6	P43360	314 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	GPS2	Q13227	327 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	KCNJ11	Q14654	390 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	SLC5A12	Q1EHB4	618 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	PLEKHS1	Q5SXH7	462 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	IZUMO3	Q5VZ72	239 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	KIAA0930	Q6ICG6	404 aa	Predicted RBP	12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	TTC27	Q6P3X3	843 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	CES3	Q6UWW8	571 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	CDHR3	Q6ZTQ4	885 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	TRIM73	Q86UV7	250 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	DSEL	Q8IZU8	1212 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	SLC35F6	Q8N357	371 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	OR1L3	Q8NH93	324 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	LKAAEAR1	Q8TD35	194 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	MAGEC3	Q8TD91	643 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	THAP4	Q8WY91	577 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	MS4A14	Q96JA4	679 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	OR2A14	Q96R47	310 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	OSBPL9	Q96SU4	736 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	NRTN	Q99748	197 aa		12.17	□□□□□ -0.46
RBBP4-215	ENST00000524393	DPH2	Q9BQC3	489 aa	Predicted RBP	12.17	□□□□□ -0.46

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