RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 NUDT13Q86X67 352 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 FAM219AQ8IW50 185 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 FAM114A1Q8IWE2 563 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 ODF3L1Q8IXM7 274 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 KCNH5Q8NCM2 988 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 OR7G3Q8NG95 312 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 FIG4Q92562 907 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 TEKT1Q969V4 418 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 SGK494Q96LW2 274 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 UTP14AQ9BVJ6 771 aaKnown RBP5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 GTPBP2Q9BX10 602 aaKnown RBP5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 SEZ6LQ9BYH1 1024 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 VN1R1Q9GZP7 353 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 IL25Q9H293 177 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 TMEM206Q9H813 350 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 SERINC1Q9NRX5 453 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 CACNG4Q9UBN1 327 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 LRWD1Q9UFC0 647 aa5.04□□□□□ -1.6
HMGB1P46-201ENST00000520062 TEX13DA0A0J9YY54 714 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 C5orf60A6NFR6 353 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 CD8B2A6NJW9 211 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 PGLSO95336 258 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 RLN1P04808 185 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 TFAP2AP05549 437 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 INHBAP08476 426 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 SPP1P10451 314 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 FCGR1AP12314 374 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 HLA-DOBP13765 273 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 DAOP14920 347 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 ITGA2P17301 1181 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 AZGP1P25311 298 aaKnown RBP5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 PTGER4P35408 488 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 HSD17B3P37058 310 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 SNU13P55769 128 aaKnown RBP5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 UBASH3AP57075 661 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 RELQ04864 619 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 COASYQ13057 564 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 TNK1Q13470 666 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 ZNF789Q5FWF6 425 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 LRRC73Q5JTD7 316 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 NDUFAF5Q5TEU4 345 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 ZNF425Q6IV72 752 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 SLC27A1Q6PCB7 646 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 TMEM182Q6ZP80 229 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 NUP54Q7Z3B4 507 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 PHLDB2Q86SQ0 1253 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 DCP1BQ8IZD4 617 aaKnown RBP5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 FBXL14Q8N1E6 418 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 MUC20Q8N307 709 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 NAT8LQ8N9F0 302 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 ELP5Q8TE02 316 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 RNF128Q8TEB7 428 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 TMED6Q8WW62 240 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 OXNAD1Q96HP4 312 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 NTPCRQ9BSD7 190 aaKnown RBP5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 FKRPQ9H9S5 495 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 OCIAD1Q9NX40 245 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 SEPT10Q9P0V9 454 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 B3GAT1Q9P2W7 334 aa5.03□□□□□ -1.6
HMGB1P46-201ENST00000520062 A0A0G2JPF8 293 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 CTAGE9A4FU28 777 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 SRRM3A6NNA2 597 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 HNRNPCL3B7ZW38 293 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 LIPFP07098 398 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 CTAGE8P0CG41 777 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 HNRNPCL4P0DMR1 293 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 TGFB3P10600 412 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 HAPLN1P10915 354 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 MYL6BP14649 208 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 SCP2P22307 547 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 CBLP22681 906 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 RGS7P49802 495 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 GMPSP49915 693 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 MFAP3P55082 362 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 PTENP60484 403 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 MRPS21P82921 87 aaKnown RBP5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 PRKAA1Q13131 559 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 MFAP5Q13361 173 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 NPTX1Q15818 432 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 DUOXA1Q1HG43 343 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 FUT11Q495W5 492 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 ASPRV1Q53RT3 343 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 ELFN2Q5R3F8 820 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 RAD9BQ6WBX8 426 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 SATL1Q86VE3 508 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 CTAGE4Q8IX94 777 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 ARHGAP24Q8N264 748 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 RYBPQ8N488 228 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 TRIML1Q8N9V2 468 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 SMRP1Q8NCR6 262 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 B4GALNT2Q8NHY0 566 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 ST6GALNAC6Q969X2 333 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 EXOC4Q96A65 974 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 CABS1Q96KC9 395 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 MYADMQ96S97 322 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 ARRDC1-AS1Q9H2J1 176 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 GAREM1Q9H706 876 aa5.02□□□□□ -1.61
HMGB1P46-201ENST00000520062 KLHL1Q9NR64 748 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms