RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PLEKHS1Q5SXH7 462 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 TMTC4Q5T4D3 741 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 LCN10Q6JVE6 187 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 CCDC137Q6PK04 289 aaKnown RBP9.05□□□□□ -0.96
HDAC3-215ENST00000519474 ZNF605Q86T29 641 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 SLC22A15Q8IZD6 547 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 LMNTD1Q8N9Z9 388 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 MCUQ8NE86 351 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 OR5K2Q8NHB8 316 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 ACTRT1Q8TDG2 376 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 ASZ1Q8WWH4 475 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 BIRC8Q96P09 236 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 OR2A14Q96R47 310 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 HGH1Q9BTY7 390 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 MENTQ9BUN1 341 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 TUBB2BQ9BVA1 445 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 PITPNM3Q9BZ71 974 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 FAM60AQ9NP50 221 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 LATS2Q9NRM7 1088 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 SPHK1Q9NYA1 384 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 ACTR10Q9NZ32 417 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 GALPQ9UBC7 116 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 CROTQ9UKG9 612 aa9.05□□□□□ -0.96
HDAC3-215ENST00000519474 TDRKHQ9Y2W6 561 aaKnown RBP9.05□□□□□ -0.96
HDAC3-215ENST00000519474 PIPSLA2A3N6 862 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 GSAPA4D1B5 854 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 SDR42E2A6NKP2 422 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 USP27XA6NNY8 438 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 C2orf74A8MZ97 194 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 F8W8V4 182 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 MATN2O00339 956 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 ZSCAN12O43309 604 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 HCRTR1O43613 425 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 KATNA1O75449 491 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 NDUFS3O75489 264 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 RECKO95980 971 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 MT-ND3P03897 115 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 CHRM5P08912 532 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-215ENST00000519474 FAM87AP0C7U9 286 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 MLNP12872 115 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 RPS3P23396 243 aaKnown RBP eCLIP9.04□□□□□ -0.96
HDAC3-215ENST00000519474 OAS2P29728 719 aaKnown RBP9.04□□□□□ -0.96
HDAC3-215ENST00000519474 FMO4P31512 558 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 GABRA4P48169 554 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 SARNPP82979 210 aaKnown RBP9.04□□□□□ -0.96
HDAC3-215ENST00000519474 ZIC1Q15915 447 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 ANKRD20A4Q4UJ75 823 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 ZNF789Q5FWF6 425 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 AARS2Q5JTZ9 985 aaKnown RBP9.04□□□□□ -0.96
HDAC3-215ENST00000519474 ATP1A1-AS1Q5TC04 95 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 PTRHD1Q6GMV3 140 aaKnown RBP9.04□□□□□ -0.96
HDAC3-215ENST00000519474 C16orf46Q6P387 395 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 CYB5D1Q6P9G0 228 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 ZNF517Q6ZMY9 492 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-215ENST00000519474 CDHR3Q6ZTQ4 885 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 SDCCAG8Q86SQ7 713 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-215ENST00000519474 AGGF1Q8N302 714 aaeCLIP9.04□□□□□ -0.96
HDAC3-215ENST00000519474 NAT8LQ8N9F0 302 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 OR8K5Q8NH50 307 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 OR1L3Q8NH93 324 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 CFAP61Q8NHU2 1237 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 SREK1Q8WXA9 508 aaKnown RBP9.04□□□□□ -0.96
HDAC3-215ENST00000519474 KIAA1143Q96AT1 154 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-215ENST00000519474 STAMBPL1Q96FJ0 436 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 SIGLEC10Q96LC7 697 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 CATSPER2Q96P56 530 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 RUFY1Q96T51 708 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 TCF12Q99081 682 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 ARHGAP9Q9BRR9 750 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 TRIM56Q9BRZ2 755 aaKnown RBP9.04□□□□□ -0.96
HDAC3-215ENST00000519474 KLHL25Q9H0H3 589 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 SYTL2Q9HCH5 934 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 STARD5Q9NSY2 213 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 LNPEPQ9UIQ6 1025 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 SERTAD3Q9UJW9 196 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 PLAGL1Q9UM63 463 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 SNX12Q9UMY4 172 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 FARSAQ9Y285 508 aaKnown RBP9.04□□□□□ -0.96
HDAC3-215ENST00000519474 PCDHGA6Q9Y5G7 932 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 SPTBP11277 2137 aa9.04□□□□□ -0.96
HDAC3-215ENST00000519474 ZCWPW2A0A1B0GU75 182 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 FAM237BA0A1B0GVD1 139 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 H3BMH7 237 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 GOLGA8MH3BSY2 632 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 CES2O00748 559 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 PRICKLE3O43900 615 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-215ENST00000519474 CREG1O75629 220 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 TMEM63AO94886 807 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 S1PR4O95977 384 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 CAPN1P07384 714 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 MSL3P1P0C860 447 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 PRKAR1AP10644 381 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 SFTPCP11686 197 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 UGT2B7P16662 529 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 IVDP26440 423 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 PEBP1P30086 187 aaKnown RBP9.03□□□□□ -0.96
HDAC3-215ENST00000519474 SHMT2P34897 504 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 MAGEA3P43357 314 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 MC1RQ01726 317 aa9.03□□□□□ -0.96
HDAC3-215ENST00000519474 CDC20Q12834 499 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms