RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PRF1P14222 555 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMEM11P17152 192 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 TNFAIP3P21580 790 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ADRA1DP25100 572 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 GABRB3P28472 473 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 PDHA2P29803 388 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CD6P30203 668 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 HOXC8P31273 242 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 MCM7P33993 719 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CTNNB1P35222 781 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ETV6P41212 452 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC15A1P46059 708 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 NSFP46459 744 aaKnown RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ALDH9A1P49189 494 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 P2RY4P51582 365 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ALDH3A2P51648 485 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CLCN5P51795 746 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CAPZA1P52907 286 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ARFIP1P53367 373 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 SUCLG1P53597 346 aaKnown RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CDH4P55283 916 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 TAS2R60P59551 318 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 SNAP25P60880 206 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ASIC1P78348 528 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CCNA1P78396 465 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 NFKB2Q00653 900 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 FADDQ13158 208 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 BTN1A1Q13410 526 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 MTMR1Q13613 665 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 DOC2AQ14183 400 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CTTNQ14247 550 aaKnown RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 FGL2Q14314 439 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 NEDD8Q15843 81 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 NTRK3Q16288 839 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 SGCAQ16586 387 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 BMT2Q1RMZ1 405 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 UGT3A2Q3SY77 523 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF404Q494X3 552 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CDNFQ49AH0 187 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 LRRC24Q50LG9 513 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 XKR9Q5GH70 373 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 PIGGQ5H8A4 983 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 MDH1BQ5I0G3 518 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 THEM4Q5T1C6 240 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 GPR158Q5T848 1215 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 FAXCQ5TGI0 409 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 FAM171A1Q5VUB5 890 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 TPGS2Q68CL5 300 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 DENND5AQ6IQ26 1287 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 PLBD1Q6P4A8 553 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 POMZP3Q6PJE2 187 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 MAMDC4Q6UXC1 1216 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 G2E3Q7L622 706 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 RAB11FIP2Q7L804 512 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 PAGE2Q7Z2X7 111 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 EFL1Q7Z2Z2 1120 aaKnown RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 IRF2BP2Q7Z5L9 587 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 COMMD7Q86VX2 200 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 LDHDQ86WU2 507 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ARID3BQ8IVW6 561 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 FAM178BQ8IXR5 827 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 FAM217AQ8IXS0 508 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 RAVER1Q8IY67 606 aaKnown RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 EID3Q8N140 333 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 OR8H3Q8N146 312 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 C4orf33Q8N1A6 199 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF276Q8N554 614 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 LRRC17Q8N6Y2 441 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CNTD1Q8N815 330 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 IL17RCQ8NAC3 791 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 SYT8Q8NBV8 401 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZBTB44Q8NCP5 570 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 HIPK4Q8NE63 616 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC24A4Q8NFF2 622 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CMASQ8NFW8 434 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZFP90Q8TF47 636 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC22A17Q8WUG5 538 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC7A6Q92536 515 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 MYLPFQ96A32 169 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC22A18Q96BI1 424 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 EAF2Q96CJ1 260 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CHFRQ96EP1 664 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 PGAP3Q96FM1 320 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMEM41AQ96HV5 264 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC45A3Q96JT2 553 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 RNF170Q96K19 258 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 C9orf72Q96LT7 481 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 EYA3Q99504 573 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 TCF25Q9BQ70 676 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 LBHD1Q9BQE6 289 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 MED18Q9BUE0 208 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ADI1Q9BV57 179 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 FUNDC2Q9BWH2 189 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 LGR4Q9BXB1 951 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 FRMD8P1Q9BZ68 369 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 BCL2L14Q9BZR8 327 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 OR51V1Q9H2C8 321 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 MUC13Q9H3R2 512 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 RNPEPQ9H4A4 650 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 FAM83DQ9H4H8 585 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms