RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 DPPA4Q7L190 304 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 EFL1Q7Z2Z2 1120 aaKnown RBP3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 ERASQ7Z444 233 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 ANKRD46Q86W74 232 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 MAPKAPK5Q8IW41 473 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 LRRC56Q8IYG6 542 aaPredicted RBP3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 TP53I13Q8NBR0 393 aaPredicted RBP3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 B3GALNT2Q8NCR0 500 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 STKLD1Q8NE28 680 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 FAM71CQ8NEG0 241 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 TRIM58Q8NG06 486 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 LILRB4Q8NHJ6 448 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 BBS10Q8TAM1 723 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 TBC1D16Q8TBP0 767 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 SLC22A8Q8TCC7 542 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 HM13Q8TCT9 377 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 ATP8B4Q8TF62 1192 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 INPP5DQ92835 1189 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 DVL3Q92997 716 aaPredicted RBP3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 DHTKD1Q96HY7 919 aaPredicted RBP3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF396Q96N95 335 aaPredicted RBP3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 SFXN2Q96NB2 322 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 PLEKHG4BQ96PX9 1271 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 GPA33Q99795 319 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 COQ7Q99807 217 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 FAM110AQ9BQ89 295 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 TUBA1CQ9BQE3 449 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 ATG101Q9BSB4 218 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMEM79Q9BSE2 394 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 CRNKL1Q9BZJ0 848 aaKnown RBP3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 PKIBQ9C010 78 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 TSPYL1Q9H0U9 437 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 SIRPDQ9H106 197 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 SLC6A17Q9H1V8 727 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 RAD21L1Q9H4I0 556 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 HAUS4Q9H6D7 363 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 TXNRD2Q9NNW7 524 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 GPR108Q9NPR9 543 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 YAE1D1Q9NRH1 226 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 PIGVQ9NUD9 493 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 AGPAT5Q9NUQ2 364 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 DPP3Q9NY33 737 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 OR14J1Q9UGF5 321 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 FZD4Q9ULV1 537 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 FOXA2Q9Y261 457 aaPredicted RBP3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF510Q9Y2H8 683 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 MRPS2Q9Y399 296 aaKnown RBP3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 COMMD3-BMI1R4GMX3 469 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 ABCC4O15439 1325 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 NPC1L1Q9UHC9 1359 aa3.84□□□□□ -1.79
RNU4-60P-201ENST00000517239 A0A0U1RRA0 63 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 A0A1B0GUL7 405 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 A0A1W2PPQ1 181 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 TMEM8BA6NDV4 472 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 DDTLA6NHG4 134 aaPredicted RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 MEI4A8MW99 385 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 H3BMM5 538 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 GOLGA8SH3BPF8 625 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 LGALS8O00214 317 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 WRBO00258 174 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 OGTO15294 1046 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 FLRT2O43155 660 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 XRCC3O43542 346 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 KLK8O60259 260 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 CSDE1O75534 798 aaKnown RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 CTAG2O75638 210 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 MFN2O95140 757 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 OR6A2O95222 327 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 AGTP01019 485 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 HMBSP08397 361 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 IL6RP08887 468 aaPredicted RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 CCDC172P0C7W6 258 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 NR2F6P10588 404 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 RALBP11234 206 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 CKMT2P17540 419 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 NCF2P19878 526 aaPredicted RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 PIK3R1P27986 724 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 CTGFP29279 349 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 MARCKSP29966 332 aaPredicted RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 RFC2P35250 354 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 FMO5P49326 533 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 COPB1P53618 953 aaKnown RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 CACNA2D1P54289 1103 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 MFAP3P55082 362 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 TPTEP56180 551 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 GSDMDP57764 484 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 RPS8P62241 208 aaKnown RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 SRSF3P84103 164 aaKnown RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 CDK3Q00526 305 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC34A1Q06495 639 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 PRKAA1Q13131 559 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 DNAJC3Q13217 504 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 SRSF5Q13243 272 aaKnown RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 MELKQ14680 651 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 RFTN1Q14699 578 aaPredicted RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 ARHGEF6Q15052 776 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 STXBP2Q15833 593 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 KCNA10Q16322 511 aa3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 CTU2Q2VPK5 515 aaKnown RBP3.83□□□□□ -1.8
RNU4-60P-201ENST00000517239 ZNF792Q3KQV3 632 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms