RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 SYNCRIPO60506 623 aaKnown RBP3.07□□□□□ -1.92
HERC4-215ENST00000515753 FMO6PO60774 539 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 AVILO75366 819 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 PSMD10O75832 226 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 PDE9AO76083 593 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 LDLRP01130 860 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 IGHV4-39P01824 125 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 CRYAAP02489 173 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 FDPSP14324 419 aaKnown RBP3.07□□□□□ -1.92
HERC4-215ENST00000515753 IL7RP16871 459 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 POLR2CP19387 275 aaPredicted RBP3.07□□□□□ -1.92
HERC4-215ENST00000515753 KCNA5P22460 613 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 ACADLP28330 430 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 HOXC8P31273 242 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 TLX1P31314 330 aaPredicted RBP3.07□□□□□ -1.92
HERC4-215ENST00000515753 TIMP3P35625 211 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 AHRP35869 848 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 PRCPP42785 496 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 BPIFB3P59826 476 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 MRPS5P82675 430 aaKnown RBP3.07□□□□□ -1.92
HERC4-215ENST00000515753 SCN1BQ07699 218 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 SREBF2Q12772 1141 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 IKQ13123 557 aaPredicted RBP3.07□□□□□ -1.92
HERC4-215ENST00000515753 CAMK2DQ13557 499 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 GRAPQ13588 217 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 IDI1Q13907 227 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 PKN2Q16513 984 aaKnown RBP3.07□□□□□ -1.92
HERC4-215ENST00000515753 PNLIPRP3Q17RR3 467 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 C2orf76Q3KRA6 126 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 ZNF805Q5CZA5 627 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 ACSM2BQ68CK6 577 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 TATDN1Q6P1N9 297 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 IYDQ6PHW0 289 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 TRAT1Q6PIZ9 186 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 RBPMS2Q6ZRY4 209 aaKnown RBP3.07□□□□□ -1.92
HERC4-215ENST00000515753 PLEKHM3Q6ZWE6 761 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 ERN2Q76MJ5 926 aaKnown RBP3.07□□□□□ -1.92
HERC4-215ENST00000515753 CCDC13Q8IYE1 715 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 CIARTQ8N365 385 aaPredicted RBP3.07□□□□□ -1.92
HERC4-215ENST00000515753 TEX9Q8N6V9 391 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 NAT8LQ8N9F0 302 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 XXYLT1Q8NBI6 393 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 SPC24Q8NBT2 197 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 OR1J2Q8NGS2 313 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 MOSPD2Q8NHP6 518 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 GRK7Q8WTQ7 553 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 SLC38A5Q8WUX1 472 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 SNX21Q969T3 373 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 LRRC59Q96AG4 307 aaKnown RBP3.07□□□□□ -1.92
HERC4-215ENST00000515753 ARSGQ96EG1 525 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 EGLN2Q96KS0 407 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 FER1L6-AS2Q96M78 137 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 OR2A14Q96R47 310 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 PCYT2Q99447 389 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 PI4K2AQ9BTU6 479 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 CCDC106Q9BWC9 280 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 ANKRD2Q9GZV1 360 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 HRH4Q9H3N8 390 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 SCRT2Q9NQ03 307 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 ARHGEF38Q9NXL2 777 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 TCF19Q9Y242 345 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 TMEM94Q12767 1356 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 PIK3R4Q99570 1358 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 ANKRD30AQ9BXX3 1397 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 FGD6Q6ZV73 1430 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 NCOA2Q15596 1464 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 LRRC9Q6ZRR7 1453 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 EHBP1L1Q8N3D4 1523 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 LRRC7Q96NW7 1537 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 PLXNC1O60486 1568 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 PREX2Q70Z35 1606 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 MROH2AA6NES4 1674 aa3.07□□□□□ -1.92
HERC4-215ENST00000515753 LOC102723996A0A087X1L8 192 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 TRAV34A0A0B4J273 112 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 A0A0U1RQK1 487 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 ZNF320A2RRD8 509 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 URADA6NGE7 173 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 ANKRD66B4E2M5 251 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 CCDC188H7C350 402 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 DDX39AO00148 427 aaKnown RBP3.06□□□□□ -1.92
HERC4-215ENST00000515753 CAPN9O14815 690 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 ATP2A1O14983 1001 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 SLC22A3O75751 556 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 TPPPO94811 219 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 SIX3O95343 332 aaPredicted RBP3.06□□□□□ -1.92
HERC4-215ENST00000515753 MT-ND3P03897 115 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 ERCC2P18074 760 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 TRIM21P19474 475 aaKnown RBP3.06□□□□□ -1.92
HERC4-215ENST00000515753 HLA-DPA1P20036 260 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 FMO5P49326 533 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 CCR3P51677 355 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 CSE1LP55060 971 aaKnown RBP3.06□□□□□ -1.92
HERC4-215ENST00000515753 PHEXP78562 749 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 YWHAHQ04917 246 aaPredicted RBP3.06□□□□□ -1.92
HERC4-215ENST00000515753 HYAL4Q2M3T9 481 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 ZNF674Q2M3X9 581 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 TYSND1Q2T9J0 566 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 TMEM35AQ53FP2 167 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
HERC4-215ENST00000515753 IRAK1BP1Q5VVH5 260 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms