RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 CAND1Q86VP6 1230 aaKnown RBP22.31■■□□□ 1.16
CLDND1-230ENST00000514537 LRRC6Q86X45 466 aa22.31■■□□□ 1.16
CLDND1-230ENST00000514537 CT55Q8WUE5 264 aa22.31■■□□□ 1.16
CLDND1-230ENST00000514537 CPT1BQ92523 772 aa22.31■■□□□ 1.16
CLDND1-230ENST00000514537 OSBPL9Q96SU4 736 aa22.31■■□□□ 1.16
CLDND1-230ENST00000514537 ADNPQ9H2P0 1102 aa22.31■■□□□ 1.16
CLDND1-230ENST00000514537 AKIRIN1Q9H9L7 192 aaPredicted RBP22.31■■□□□ 1.16
CLDND1-230ENST00000514537 STARD5Q9NSY2 213 aa22.31■■□□□ 1.16
CLDND1-230ENST00000514537 GCN1Q92616 2671 aaKnown RBP22.3■■□□□ 1.16
CLDND1-230ENST00000514537 CPNE3O75131 537 aaKnown RBP22.3■■□□□ 1.16
CLDND1-230ENST00000514537 APOA4P06727 396 aa22.3■■□□□ 1.16
CLDND1-230ENST00000514537 CHRM5P08912 532 aaPredicted RBP22.3■■□□□ 1.16
CLDND1-230ENST00000514537 PLA2G2AP14555 144 aa22.3■■□□□ 1.16
CLDND1-230ENST00000514537 PVRP15151 417 aa22.3■■□□□ 1.16
CLDND1-230ENST00000514537 CCR10P46092 362 aa22.3■■□□□ 1.16
CLDND1-230ENST00000514537 DNASE1L3Q13609 305 aa22.3■■□□□ 1.16
CLDND1-230ENST00000514537 PTRHD1Q6GMV3 140 aaKnown RBP22.3■■□□□ 1.16
CLDND1-230ENST00000514537 C16orf46Q6P387 395 aa22.3■■□□□ 1.16
CLDND1-230ENST00000514537 TMEM126BQ8IUX1 230 aa22.3■■□□□ 1.16
CLDND1-230ENST00000514537 MCUQ8NE86 351 aa22.3■■□□□ 1.16
CLDND1-230ENST00000514537 PANX3Q96QZ0 392 aa22.3■■□□□ 1.16
CLDND1-230ENST00000514537 OR2A14Q96R47 310 aa22.3■■□□□ 1.16
CLDND1-230ENST00000514537 FANCEQ9HB96 536 aa22.3■■□□□ 1.16
CLDND1-230ENST00000514537 SPHK1Q9NYA1 384 aa22.3■■□□□ 1.16
CLDND1-230ENST00000514537 GNPTGQ9UJJ9 305 aa22.3■■□□□ 1.16
CLDND1-230ENST00000514537 PCDHB3Q9Y5E6 796 aa22.3■■□□□ 1.16
CLDND1-230ENST00000514537 C21orf140B9A014 251 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 MAP3K7O43318 606 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 KDM1AO60341 852 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 KATNA1O75449 491 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 TMEM63AO94886 807 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 RECKO95980 971 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 MLNP12872 115 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 UGT2B7P16662 529 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 POLE2P56282 527 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 TYSND1Q2T9J0 566 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 ATP1A1-AS1Q5TC04 95 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 KIAA0930Q6ICG6 404 aaPredicted RBP22.29■■□□□ 1.16
CLDND1-230ENST00000514537 MRNIPQ6NTE8 343 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 SDCCAG8Q86SQ7 713 aaPredicted RBP22.29■■□□□ 1.16
CLDND1-230ENST00000514537 SLC38A9Q8NBW4 561 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 FLVCR1-AS1Q8TAF5 88 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 LRFN5Q96NI6 719 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 KLHL25Q9H0H3 589 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 TRMT1Q9NXH9 659 aaKnown RBP22.29■■□□□ 1.16
CLDND1-230ENST00000514537 PLAGL1Q9UM63 463 aa22.29■■□□□ 1.16
CLDND1-230ENST00000514537 TMEM150CB9EJG8 249 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 GOLGA8KD6RF30 607 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 GOLGA8TH3BQL2 631 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 CES2O00748 559 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 KIF5CO60282 957 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 NFATC3Q12968 1075 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 ABRQ12979 859 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 GPS2Q13227 327 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 KYNUQ16719 465 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 DEFB109BQ30KR1 87 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 ZNF789Q5FWF6 425 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 PRAMEF17Q5VTA0 474 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 FAM199XQ6PEV8 388 aaPredicted RBP22.28■■□□□ 1.16
CLDND1-230ENST00000514537 UNC5DQ6UXZ4 953 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 ZNF517Q6ZMY9 492 aaPredicted RBP22.28■■□□□ 1.16
CLDND1-230ENST00000514537 CDHR3Q6ZTQ4 885 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 OTUD6BQ8N6M0 293 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 OR1L3Q8NH93 324 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 BIRC8Q96P09 236 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 TCF12Q99081 682 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 GPR87Q9BY21 358 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 CHRNA10Q9GZZ6 450 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 SNX12Q9UMY4 172 aa22.28■■□□□ 1.16
CLDND1-230ENST00000514537 MAGEB16A2A368 324 aa22.27■■□□□ 1.16
CLDND1-230ENST00000514537 KPNA5O15131 536 aa22.27■■□□□ 1.16
CLDND1-230ENST00000514537 PHF2O75151 1096 aa22.27■■□□□ 1.16
CLDND1-230ENST00000514537 CREG1O75629 220 aa22.27■■□□□ 1.16
CLDND1-230ENST00000514537 FNTAP49354 379 aa22.27■■□□□ 1.16
CLDND1-230ENST00000514537 ERV3-1Q14264 604 aa22.27■■□□□ 1.16
CLDND1-230ENST00000514537 TMED2Q15363 201 aa22.27■■□□□ 1.16
CLDND1-230ENST00000514537 CTSL3PQ5NE16 218 aa22.27■■□□□ 1.16
CLDND1-230ENST00000514537 TRIM73Q86UV7 250 aa22.27■■□□□ 1.16
CLDND1-230ENST00000514537 HOOK3Q86VS8 718 aa22.27■■□□□ 1.16
CLDND1-230ENST00000514537 C19orf47Q8N9M1 422 aaKnown RBP22.27■■□□□ 1.16
CLDND1-230ENST00000514537 APOBEC4Q8WW27 367 aaKnown RBP22.27■■□□□ 1.16
CLDND1-230ENST00000514537 LPGAT1Q92604 370 aa22.27■■□□□ 1.16
CLDND1-230ENST00000514537 MENTQ9BUN1 341 aa22.27■■□□□ 1.16
CLDND1-230ENST00000514537 SLC25A18Q9H1K4 315 aa22.27■■□□□ 1.16
CLDND1-230ENST00000514537 XAB2Q9HCS7 855 aaKnown RBP22.27■■□□□ 1.16
CLDND1-230ENST00000514537 TUBD1Q9UJT1 453 aa22.27■■□□□ 1.16
CLDND1-230ENST00000514537 SERTAD3Q9UJW9 196 aa22.27■■□□□ 1.16
CLDND1-230ENST00000514537 FAM237BA0A1B0GVD1 139 aa22.26■■□□□ 1.15
CLDND1-230ENST00000514537 SDR42E2A6NKP2 422 aa22.26■■□□□ 1.15
CLDND1-230ENST00000514537 RPN2P04844 631 aa22.26■■□□□ 1.15
CLDND1-230ENST00000514537 PKLRP30613 574 aa22.26■■□□□ 1.15
CLDND1-230ENST00000514537 RAB28P51157 221 aa22.26■■□□□ 1.15
CLDND1-230ENST00000514537 ADARP55265 1226 aaKnown RBP22.26■■□□□ 1.15
CLDND1-230ENST00000514537 EIF3BP55884 814 aaKnown RBP22.26■■□□□ 1.15
CLDND1-230ENST00000514537 KCNAB2Q13303 367 aa22.26■■□□□ 1.15
CLDND1-230ENST00000514537 GRB7Q14451 532 aa22.26■■□□□ 1.15
CLDND1-230ENST00000514537 KIR2DS3Q14952 304 aa22.26■■□□□ 1.15
CLDND1-230ENST00000514537 ZIC1Q15915 447 aa22.26■■□□□ 1.15
CLDND1-230ENST00000514537 PLEKHS1Q5SXH7 462 aa22.26■■□□□ 1.15
CLDND1-230ENST00000514537 RNF187Q5TA31 235 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms